演化之聲
THE SOUND OF EVOLUTION
Human Gene AtlasHOMO SAPIENS
HUMAN PROTEIN-CODING GENE

ZFP36TIS11

ZFP36 zinc finger CCCH-type

ZFP36 zinc finger CCCH-type 是一種鋅指 RNA 結合蛋白,主要促進含 AU-rich element 的 mRNA 去腺苷化與降解,調節轉錄後基因表現。

Homo sapiens19q13.2UniProt P26651
OFFICIAL SYMBOL
ZFP36
CHROMOSOME
19
UNIPROT
P26651
PDB / ALPHAFOLD
4J8S
01 / GENE OVERVIEW

基因總覽

ZFP36 zinc finger CCCH-type 是由 ZFP36 編碼的蛋白質,屬於 CCCH-type 鋅指 RNA 結合蛋白。其蛋白質由 326 個胺基酸組成,帶有兩個 C3H1-type zinc finger domains,並含有數段 P-P-P-P-G 重複序列。這些結構特徵與其辨識 RNA 及連結 mRNA 調控途徑的能力相關。ZFP36 可在細胞核與細胞質之間移動,參與細胞質 RNA 調控,也具有核內前體 mRNA 處理相關作用;其主要角色是調節多種 mRNA 的穩定性與表現。

Official symbol
ZFP36
Gene name
ZFP36 zinc finger CCCH-type
Organism
Homo sapiens
Gene type
Protein coding
HGNC ID
HGNC:12862
UniProt
P26651
02 / NOMENCLATURE

基因異名與舊稱

Alternative gene names & synonyms
TIS11G0S24TTPNUP475

異名取自 HGNC,可能包含歷史名稱;蛋白質名稱以 UniProt 註解為準。

03 / GENOMIC CONTEXT

染色體位置與基因結構

Chromosome 1919q13.2
chr19 · 58,617,616 bp · GRCh38chr19p13.3 · 1–6900000 · gnegchr19p13.2 · 6900001–12600000 · gpos25chr19p13.13 · 12600001–13800000 · gnegchr19p13.12 · 13800001–16100000 · gpos25chr19p13.11 · 16100001–19900000 · gnegchr19p12 · 19900001–24200000 · gvarchr19p11 · 24200001–26200000 · acenchr19q11 · 26200001–28100000 · acenchr19q12 · 28100001–31900000 · gvarchr19q13.11 · 31900001–35100000 · gnegchr19q13.12 · 35100001–37800000 · gpos25chr19q13.13 · 37800001–38200000 · gnegchr19q13.2 · 38200001–42900000 · gpos25chr19q13.31 · 42900001–44700000 · gnegchr19q13.32 · 44700001–47500000 · gpos25chr19q13.33 · 47500001–50900000 · gnegchr19q13.41 · 50900001–53100000 · gpos25chr19q13.42 · 53100001–55800000 · gnegchr19q13.43 · 55800001–58617616 · gpos25ZFP36pq1 bp58,617,616 bp
GRCh38 / 1-based inclusiveDirection: forward strand (+)
Genomic coordinates
chr19:39,406,412–39,411,635
Gene span
5,224 bp
Strand
Forward (+)
Gene assembly
GRCh38
查看實際轉錄本與 exon 註解
TranscriptGenomic coordinatesExons
ENST00000597629 ★39,406,847–39,409,4072
ENST0000091841639,406,412–39,409,4072
ENST0000110243339,406,412–39,409,4072
ENST0000112277839,406,412–39,409,4132
ENST0000112277939,406,412–39,409,4072
ENST0000113047339,406,412–39,411,6352
ENST0000059404539,406,857–39,408,1792

顯示 7/7 個蛋白質編碼轉錄本;canonical 優先。

帶型與著絲點依 Ensembl 座標繪製;核染色體長度以 GRCh38 第 1 號染色體為共同尺度。黃色標記表示本基因位置,細小區間加粗以利辨識;實際基因長度與 exon 見下方資料。

04 / BIOLOGICAL FUNCTION

分子功能與生物學過程

ZFP36 主要辨識多種 mRNA 3′ 非翻譯區中的 AU-rich element(ARE),並充當 RNA 結合接頭,將相關訊號連結至 mRNA 降解機制。它促進 ARE-mRNA 的 poly(A) 尾移除(去腺苷化),使轉錄本較不穩定,進而降低其支持蛋白質合成的能力。ZFP36 也會招募細胞質 RNA 降解因子;它與 CNOT1 的結合可招募去腺苷化酶 CNOT7,並可能連結 CCR4-NOT complex。ZFP36 還能促進目標 RNA 去帽,並將 ARE-mRNA 導向 processing bodies。它也與 argonaute RISC 催化成分合作,協助 microRNA 對含 ARE 的 mRNA 進行調控。其自身 mRNA 含有可被辨識的 ARE,因此 ZFP36 也能藉由促進自身轉錄本降解形成自我調節。除了 ARE 轉錄本,來源亦指出它可在轉錄後層級調控非 ARE 目標,例如 MHC class I mRNA;在細胞核中,它會影響前體 mRNA 處理,並在 LPS 刺激的巨噬細胞中抑制 PABPN1 刺激的核內 polyadenylation 活性。它也參與 stress granule 與 P-body 的形成和融合調節。

這些作用涉及多種細胞情境。於 IFN 和/或 LPS 誘導的巨噬細胞中,ZFP36 促進 TNF 及其他發炎相關 ARE-mRNA 降解,與限制發炎反應有關;它也參與樹突細胞成熟的轉錄後調控,形成限制發炎反應的負回饋。內皮細胞缺氧反應中,ZFP36 促進 HIF1A mRNA 降解。來源亦指出,它可促進前脂肪細胞早期脂肪生成,並透過促進 STAT5B mRNA 降解而負向調節造血/紅系細胞分化;在骨骼肌衛星細胞中,促進 MYOD1 mRNA 降解與維持細胞靜止狀態有關。此外,ZFP36 參與角質形成細胞增殖、分化與凋亡的調節,並在乳癌細胞中藉由抑制細胞增殖發揮腫瘤抑制作用。微生物感染相關資料則指出,ZFP36 負向調節 HTLV-1 TAX 依賴的病毒長末端重複序列啟動子轉錄活化。

05 / GENE REGULATION

Promoter 與基因調控

到

以 TSS = 0 為基準:負數為上游、正數為下游,包含起點與終點。每次最多取得 100,000 bp。

TSS: 39406847 · 正股
依所選 TSS 來源,取得指定上、下游範圍的基因組序列。
擷取區間依所選 TSS 計算;調控註解與實驗支持的 TSS 可在下方查閱。
>ZFP36 ENST00000597629 GRCh38 chr19:39405847-39406947 strand=1 5′→3′
相對 TSS:-1000 到 +100 bp;1101 bp
依轉錄本 TSS 擷取的基因組序列;TSS = 0,兩端包含,未驗證為 promoter
CCTCCAAGGCCTGCTGGCTCTTTCTTGGCACTTTGCTCTGCAGATTTCTTTCCGTAAGTGCTTATTTCTC
ACAGTCTTTCTCCTTTTTGTCCAGTTTCTTTTTCTTTTTAATTTTTTTAAATAGTATTTTTTGTAGACAT
GGGATCTCACTGTTGCCCAGGCTGATCTTGAACTCCTGATCTCAGGTAATCCACCTGCCTCATCCTCTGA
AAGTACTGGGATTGGCCGGGCTTGGTGGCTCACACCTGTAATTCCAGCTCTTTGGGAGGCGGAGGTGGGA
GGATCGCTTGAGCCCCGGAGCTGGAGATTAGCCTGGGCAACATAGGGAAACCCCGTCTTTCAAAAAAAAA
AAAAAAGAAGAAGAAAAAGGAAAGAAAAACACAAAAAGTGCTGGGATCACAGGTGTGAGCCACTGCGCTC
AGCCCCTTTCTGTTTCTTTTTGTGATCCTCCCAACCCTCTTCTCCCTCTGAATCTGTCTCTGGGACTGTC
TCTGTCTCCCCGTCTTCCCTCCCTTCCTCACCCTGTCTATCTCTCTCTGTATGTCTCTTGGTGTGTGTGT
CTCTCTCGATGTTTTTCTCTCTGCCTGTCTGCCTGTCTGTACCCCTCTGCGTCTCTCCCCGCCCCCATCC
GTCTGTGTCGCACGCGCACCCCCATCGGGCTTCTGCTCTTGTCAATTGCCCCTGGGGCCCTGCCCCCACC
TCCGCCCCAGTTTCCTTCTACAAGCCTCAGTCTCCAGCTTTGAAAACTGGGCAGGCGTCCCCCCATCCGC
ACCCCCACCCCTTCCCCACGCATTCCCCGCTCGGTCACGGCTGTCCACCGGCCAAGCTCAGGCGCGTCCT
GGCCCAGGGCCGGGCGGAAGGGAACCAGTCCAGGGCCAGCCAGGCTGCGCCGGGGGCGCGCGTCCGGGAA
GCGCCCCTCCTGCCCCGCCCCCGGCCCCGGCCCCGGCCCCGCCCCGTGCTTGCAGTTTCCTATAAGTAGC
CGGCTCTCGGTGCCAGCCTCAGCCTGACTTCAGCGCTCCCACTCTCGGCCGACACCCCTCATGGCCAACC
GTTACACCATGGATCTGACTGCCATCTACGAGGTGAGTCCCCGCCGCACGG
ZFP36 位於正股。上下游依轉錄方向計算,序列一律以該方向的 5′→3′ 顯示;負股會取得反向互補序列。
EPDnew 實驗支持 promoter/TSS · 1 筆
EPDnew IDTSS(1-based)股向來源顯示區間
ZFP36_1 ↗19:39,406,847正股39,406,798–39,406,857

EPDnew human v006 · UCSC hg38,GRCh38/hg38,透過 UCSC 取得。TSS 具有 CAGE/RAMPAGE 等實驗資料支持;任意擷取的上下游區間仍需另行判讀調控功能,不能視為整段皆經功能驗證。

EPD 封存狀態 ↗ · UCSC 資料說明 ↗ · EPD team, SIB Swiss Institute of Bioinformatics; UCSC Genome Browser · CC BY 4.0

ZFP36 表現會隨細胞刺激而上升:T 細胞活化可使其上調;角質形成細胞受傷後,在表皮修復期間表現顯著增加,也可受 EGF、TNF、GM-CSF、FGF1 及 dexamethasone 誘導。LPS 可在 p38 MAPK 依賴的條件下提高其表現;蛋白質層級的上調則與 p38 MAPK 和 ERK 有關。

序列擷取依所選 TSS 與相對範圍計算;該區間的調控功能需參照相應的實驗證據。
06 / PROTEIN ANATOMY

蛋白質結構域與序列

參考蛋白質長度:326 aa

1 aa326 aa功能區域重複區鋅指
依 P26651 的 UniProt 殘基座標與蛋白質長度繪製;結構域、DNA 結合區、功能區域與基序分列,重疊註解分行顯示。區域色彩區分類型,並非活性或信心分數。

ZFP36 長 326 個胺基酸,具有兩個 C3H1-type zinc finger domains,並含有三段 P-P-P-P-G 重複序列。RNA 結合所需區域位於胺基酸 97–173;胺基酸 1–100 與 174–326 區段分別具有 mRNA 降解活化相關功能。N 端 1–15 個胺基酸對核輸出必要,95–168 區段對核定位必要。胺基酸 312–326 區域參與與 CNOT1 的交互作用;多個區段亦與 ARE-mRNA 導向 P-body 有關。

重複區P-P-P-P-G71–75 aa
重複區P-P-P-P-G198–202 aa
重複區P-P-P-P-G219–223 aa
鋅指C3H1-type 1103–131 aa
鋅指C3H1-type 2141–169 aa
功能區域Necessary for localization of ARE-containing mRNAs to processing bodies (PBs)1–174 aa
功能區域Necessary and sufficient for the association with mRNA decay enzymes and mRNA decay activation1–100 aa
功能區域Necessary for nuclear export1–15 aa
功能區域Disordered13–66 aa
功能區域Disordered78–102 aa
功能區域Necessary for nuclear localization95–168 aa
功能區域Necessary for RNA-binding97–173 aa
功能區域Necessary for localization of ARE-containing mRNAs to processing bodies (PBs)100–326 aa
功能區域Necessary for interaction with PABPN1103–194 aa
功能區域Necessary for mRNA decay activation174–326 aa
功能區域Disordered175–245 aa
功能區域Disordered273–292 aa
功能區域Interaction with CNOT1312–326 aa
07 / STRUCTURAL BIOLOGY

蛋白質三維結構

自動載入 · 可拖曳旋轉與縮放
正在載入 PDB · 4J8S…

PDB · 4J8S

X-ray · 1.55 A · B=312-326

查看原始結構紀錄 ↗

實驗模型;依序列位置著色,可能只覆蓋局部區域。

08 / SUBCELLULAR LOCALIZATION

細胞內定位

動物細胞結構與蛋白質定位細胞膜包圍細胞質;細胞核內有核仁,粗面內質網鄰接核膜,粒線體含內膜摺疊,高基氏體由堆疊扁平囊組成。深綠色圓點依來源註解標記定位,器官大小與數量為示意。圓點數量不表示含量;未繪示構造列於圖旁文字。 細胞質 細胞膜 粗面內質網與核糖體 細胞核與核膜 核仁 粒線體:外膜與含摺疊的內膜 高基氏體與運輸囊泡 胞內體、溶體與其他囊泡(示意)
定位:Nucleus;Cytoplasm;Cytoplasmic granule;Cytoplasm, P-body

ZFP36 可在細胞核與細胞質間穿梭,且此移動依賴 CRM1。 其細胞質分布可受 p38 MAPK 與 YWHAB 影響;能進出 P-body 與 stress granule,能量缺乏時會定位至 stress granule。 經 MAPKAPK2 依賴的磷酸化後,ZFP36 可被排除於 stress granule。 HTLV-1 感染相關資料則指出,ZFP36 與 TAX 在細胞核及細胞質中共定位。

深綠色圓點:來源記載的蛋白質定位;數量不表示含量。

未繪示構造:Cytoplasmic granule。這些構造未在通用細胞圖中標點,仍保留來源定位名稱。

動物細胞結構示意;器官大小與數量不按比例。點選細胞構造可查看定位註解。

09 / PROTEIN NETWORK

交互作用與訊號網絡

圖中 8 個夥伴 · 最多顯示 50 個
TIS11ZFP36CNOT1DCP1AEDC3FHL3JPH3PECAM1RUNX1T1VIM
來源支持的結構/直接結合關係其他來源關係紀錄

拖曳節點後放開可帶動位置變化;點選夥伴查看證據。位置與連線長度不代表結合強度,圖中未推定夥伴彼此之間的關係。

更多交互作用夥伴 · 已取得 8 個夥伴
第 1 頁

查看 UniProt 完整互作來源 ↗

ZFP36 與 CCR4-NOT、PAN2-PAN3 去腺苷化複合體及 RNA exosome 有關聯,並可與 CNOT1、CNOT7、DCP1A、DCP2、EXOSC2、XRN1 等 mRNA 降解因子實際交互作用。其與 CNOT1、CNOT7 的結合可促進 mRNA 去腺苷化;此外也能與 AGO2、AGO4 及多種 14-3-3 蛋白交互作用。磷酸化狀態會影響部分結合與定位,但來源指出,與 14-3-3 的特定交互作用不會阻止 CCR4-NOT 招募或 ARE-mRNA 降解。感染情境下,ZFP36 C 端與 HTLV-1 TAX C 端交互作用,並抑制 TAX 活化病毒 LTR 啟動子。

10 / HUMAN HEALTH

疾病與遺傳關聯

目前未取得此類註解。
個別變異的臨床意義取決於其證據;基因層級的疾病關聯不能套用至所有變異。
11 / CONTEXTUAL FUNCTIONAL EVIDENCE MATRIX

Contextual Functional Evidence Matrix

功能證據與細胞情境矩陣

矩陣以「功能主張」為列,以細胞情境、干預條件、量測結果與證據來源為欄,方便比較同一功能在不同條件下的支持情形。只有含情境與實驗資訊的紀錄會列入矩陣;一般功能註解另列於下方。

7 筆功能證據/註解
目前尚無同時具備實驗情境與干預/量測資訊的證據列。可查核的功能敘述列於「功能註解總覽」,空白實驗欄位不以推測補齊。
功能註解總覽 · 7 筆
功能面向功能敘述證據類型可查核來源
功能ZFP36 是鋅指 RNA 結合蛋白,可辨識多種 mRNA 3′ 非翻譯區中的 ARE,並促進其去腺苷化及降解,以調節蛋白質合成。它可招募 mRNA 降解因子,經 CNOT1 連結 CNOT7(可能也包括 CCR4-NOT),並參與自我 mRNA 降解、去帽、P-body 導引及 miRNA 協同調控。其作用涉及發炎、缺氧、脂肪生成、血球分化、肌肉衛星細胞靜止、角質形成細胞調節與乳癌細胞增殖;部分敘述標示為相似性推論。含實驗來源
證據與來源

Zinc-finger RNA-binding protein that destabilizes several cytoplasmic AU-rich element (ARE)-containing mRNA transcripts by promoting their poly(A) tail removal or deadenylation, and hence provide a mechanism for attenuating protein synthesis. Acts as an 3'-untranslated region (UTR) ARE mRNA-binding adapter protein to communicate signaling events to the mRNA decay machinery. Recruits deadenylase CNOT7 (and probably the CCR4-NOT complex) via association with CNOT1, and hence promotes ARE-mediated mRNA deadenylation. Functions also by recruiting components of the cytoplasmic RNA decay machinery to the bound ARE-containing mRNAs. Self regulates by destabilizing its own mRNA. Binds to 3'-UTR ARE of numerous mRNAs and of its own mRNA. Plays a role in anti-inflammatory responses; suppresses tumor necrosis factor (TNF)-alpha production by stimulating ARE-mediated TNF mRNA decay and several other inflammatory ARE-containing mRNAs in interferon (IFN)- and/or lipopolysaccharide (LPS)-induced macrophages (By similarity). Also plays a role in the regulation of dendritic cell maturation at the post-transcriptional level, and hence operates as part of a negative feedback loop to limit the inflammatory response. Promotes ARE-mediated mRNA decay of hypoxia-inducible factor HIF1A mRNA during the response of endothelial cells to hypoxia. Positively regulates early adipogenesis of preadipocytes by promoting ARE-mediated mRNA decay of immediate early genes (IEGs) (By similarity). Negatively regulates hematopoietic/erythroid cell differentiation by promoting ARE-mediated mRNA decay of the transcription factor STAT5B mRNA. Plays a role in maintaining skeletal muscle satellite cell quiescence by promoting ARE-mediated mRNA decay of the myogenic determination factor MYOD1 mRNA (By similarity). Associates also with and regulates the expression of non-ARE-containing target mRNAs at the post-transcriptional level, such as MHC class I mRNAs. Participates in association with argonaute RISC catalytic components in the ARE-mediated mRNA decay mechanism; assists microRNA (miRNA) targeting ARE-containing mRNAs. May also play a role in the regulation of cytoplasmic mRNA decapping; enhances decapping of ARE-containing RNAs, in vitro. Involved in the delivery of target ARE-mRNAs to processing bodies (PBs). In addition to its cytosolic mRNA-decay function, affects nuclear pre-mRNA processing (By similarity). Negatively regulates nuclear poly(A)-binding protein PABPN1-stimulated polyadenylation activity on ARE-containing pre-mRNA during LPS-stimulated macrophages (By similarity). Also involved in the regulation of stress granule (SG) and P-body (PB) formation and fusion (By similarity). Plays a role in the regulation of keratinocyte proliferation, differentiation and apoptosis. Plays a role as a tumor suppressor by inhibiting cell proliferation in breast cancer cells

PMID 10330172 ↗ · PMID 10751406 ↗ · PMID 11279239 ↗ · PMID 11719186 ↗ · PMID 12115244 ↗ · PMID 12748283 ↗ · PMID 15187101 ↗ · PMID 15634918 ↗ · PMID 15687258 ↗ · PMID 15766526 ↗ · PMID 16364915 ↗ · PMID 16702957 ↗ · PMID 17030620 ↗ · PMID 17369404 ↗ · PMID 18367721 ↗ · PMID 19188452 ↗ · PMID 20221403 ↗ · PMID 20702587 ↗ · PMID 21775632 ↗ · PMID 23644599 ↗ · PMID 25815583 ↗ · PMID 26926077 ↗ · PMID 27182009 ↗ · PMID 27193233 ↗ · PMID 31439631 ↗ · PMID 9703499 ↗

開啟資料庫紀錄 ↗

功能在微生物感染情境中,ZFP36 負向調節 HTLV-1 TAX 依賴的病毒長末端重複序列(LTR)啟動子轉錄活化。含實驗來源
證據與來源

(Microbial infection) Negatively regulates HTLV-1 TAX-dependent transactivation of viral long terminal repeat (LTR) promoter

PMID 14679154 ↗

開啟資料庫紀錄 ↗

交互作用ZFP36 與 CCR4-NOT、PAN2-PAN3 去腺苷化複合體及 RNA exosome 等 RNA 降解因子關聯,並可結合 CNOT1、CNOT7、去帽酶及核酸外切酶。它也與 AGO、14-3-3、PABPN1 等多種蛋白交互作用;其中部分結合受 RNA、磷酸化或刺激條件影響。14-3-3 相關定位調節不必然阻止 CCR4-NOT 招募或 ARE-mRNA 降解;若干敘述依相似性推論。含實驗來源
證據與來源

Associates with cytoplasmic CCR4-NOT and PAN2-PAN3 deadenylase complexes to trigger ARE-containing mRNA deadenylation and decay processes (By similarity). Part of a mRNA decay activation complex at least composed of poly(A)-specific exoribonucleases CNOT6, EXOSC2 and XRN1 and mRNA-decapping enzymes DCP1A and DCP2. Associates with the RNA exosome complex. Interacts (via phosphorylated form) with 14-3-3 proteins; these interactions promote exclusion of ZFP36 from cytoplasmic stress granules in response to arsenite treatment in a MAPKAPK2-dependent manner and does not prevent CCR4-NOT deadenylase complex recruitment or ZFP36-induced ARE-containing mRNA deadenylation and decay processes (By similarity). Interacts with 14-3-3 proteins; these interactions occur in response to rapamycin in an Akt-dependent manner. Interacts with AGO2 and AGO4. Interacts (via C-terminus) with CNOT1; this interaction occurs in a RNA-independent manner and induces mRNA deadenylation. Interacts (via N-terminus) with CNOT6. Interacts with CNOT6L (By similarity). Interacts (via C-terminus) with CNOT7; this interaction occurs in a RNA-independent manner, induces mRNA deadenylation and is inhibited in a phosphorylation MAPKAPK2-dependent manner. Interacts (via unphosphorylated form) with CNOT8; this interaction occurs in a RNA-independent manner and is inhibited in a phosphorylation MAPKAPK2-dependent manner (By similarity). Interacts with DCP1A. Interacts (via N-terminus) with DCP2. Interacts with EDC3. Interacts (via N-terminus) with EXOSC2. Interacts with heat shock 70 kDa proteins. Interacts with KHSRP; this interaction increases upon cytokine-induced treatment. Interacts with MAP3K4; this interaction enhances the association with SH3KBP1/CIN85. Interacts with MAPKAPK2; this interaction occurs upon skeletal muscle satellite cell activation (By similarity). Interacts with NCL. Interacts with NUP214; this interaction increases upon lipopolysaccharide (LPS) stimulation. Interacts with PABPC1; this interaction occurs in a RNA-dependent manner. Interacts (via hypophosphorylated form) with PABPN1 (via RRM domain and C-terminal arginine-rich region); this interaction occurs in the nucleus in a RNA-independent manner, decreases in presence of single-stranded poly(A) RNA-oligomer and in a p38 MAPK-dependent-manner and inhibits nuclear poly(A) tail synthesis (By similarity). Interacts with PAN2 (By similarity). Interacts (via C3H1-type zinc finger domains) with PKM. Interacts (via C3H1-type zinc finger domains) with nuclear RNA poly(A) polymerase (By similarity). Interacts with PPP2CA; this interaction occurs in LPS-stimulated cells and induces ZFP36 dephosphorylation, and hence may promote ARE-containing mRNAs decay (By similarity). Interacts (via C-terminus) with PRR5L (via C-terminus); this interaction may accelerate ZFP36-mediated mRNA decay during stress. Interacts (via C-terminus) with SFN; this interaction occurs in a phosphorylation-dependent manner (By similarity). Interacts (via extreme C-terminal region) with SH3KBP1/CIN85 (via SH3 domains); this interaction enhances MAP3K4-induced phosphorylation of ZFP36 at Ser-66 and Ser-93 and does not alter neither ZFP36 binding to ARE-containing transcripts nor TNF mRNA decay. Interacts with XRN1. Interacts (via C-terminus and Ser-186 phosphorylated form) with YWHAB; this interaction occurs in a p38/MAPKAPK2-dependent manner, increases cytoplasmic localization of ZFP36 and protects ZFP36 from Ser-186 dephosphorylation by serine/threonine phosphatase 2A, and hence may be crucial for stabilizing ARE-containing mRNAs (By similarity). Interacts (via phosphorylated form) with YWHAE (By similarity). Interacts (via C-terminus) with YWHAG; this interaction occurs in a phosphorylation-dependent manner (By similarity). Interacts with YWHAH; this interaction occurs in a phosphorylation-dependent manner (By similarity). Interacts with YWHAQ; this interaction occurs in a phosphorylation-dependent manner (By similarity). Interacts with (via C-terminus) YWHAZ; this interaction occurs in a phosphorylation-dependent manner (By similarity). Interacts (via P-P-P-P-G repeats) with GIGYF2; the interaction is direct (By similarity)

PMID 11719186 ↗ · PMID 14766228 ↗ · PMID 15687258 ↗ · PMID 15766526 ↗ · PMID 16126846 ↗ · PMID 16364915 ↗ · PMID 16702957 ↗ · PMID 20221403 ↗ · PMID 21964062 ↗ · PMID 23644599 ↗ · PMID 25106868 ↗ · PMID 26926077 ↗

開啟資料庫紀錄 ↗

交互作用微生物感染情境中,ZFP36 透過 C 端與 HTLV-1 TAX 的 C 端交互作用;此結合會抑制 HTLV-1 TAX 對病毒長末端重複序列(LTR)啟動子的轉錄活化。含實驗來源
證據與來源

(Microbial infection) Interacts (via C-terminus) with HTLV-1 TAX (via C-terminus); this interaction inhibits HTLV-1 TAX to transactivate viral long terminal repeat (LTR) promoter

PMID 14679154 ↗

開啟資料庫紀錄 ↗

細胞定位ZFP36 在細胞核與細胞質間依賴 CRM1 穿梭,並可進出 P-body 與 stress granule。它在 p38 MAPK 和 YWHAB 依賴條件下主要位於細胞質;能量缺乏時可進入 stress granule,而 MAPKAPK2 依賴的磷酸化會使其排除於該顆粒。它也可定位於 processing body,並與 SH3KBP1、MAP3K4 在細胞質共定位。含實驗來源
證據與來源

Nucleus; Cytoplasm; Cytoplasmic granule; Cytoplasm, P-body; Shuttles between nucleus and cytoplasm in a CRM1-dependent manner (By similarity). Localized predominantly in the cytoplasm in a p38 MAPK- and YWHAB-dependent manner (By similarity). Colocalizes with SH3KBP1 and MAP3K4 in the cytoplasm. Component of cytoplasmic stress granules (SGs) (By similarity). Localizes to cytoplasmic stress granules upon energy starvation. Localizes in processing bodies (PBs). Excluded from stress granules in a phosphorylation MAPKAPK2-dependent manner (By similarity). Shuttles in and out of both cytoplasmic P-body and SGs (By similarity)

PMID 15014438 ↗ · PMID 27182009 ↗ · PMID 10330172 ↗ · PMID 12115244 ↗ · PMID 14766228 ↗ · PMID 20221403 ↗ · PMID 17369404 ↗

開啟資料庫紀錄 ↗

細胞定位在微生物感染情境中,ZFP36 位於細胞核與細胞質,並與 HTLV-1 TAX 在兩處共定位;細胞質中的共定位區域位於細胞核周圍。含實驗來源
證據與來源

Nucleus; Cytoplasm; (Microbial infection) Colocalizes with HTLV-1 TAX in the nucleus and the cytoplasm in a region surrounding the nucleus

PMID 14679154 ↗

開啟資料庫紀錄 ↗

調控ZFP36 可因 T 細胞活化而上調,也會在角質形成細胞受傷及表皮修復期間增加。角質形成細胞中的強烈誘導因子包括 EGF 與 TNF,GM-CSF 和 FGF1 則造成中度上調,dexamethasone 也可誘導其表現。LPS 可透過 p38 MAPK 依賴途徑上調 ZFP36;蛋白質層級的上調另涉及 ERK。含實驗來源
證據與來源

Up-regulated by T cell activation. Up-regulated in keratinocytes in response to wounding. Up-regulated by lipopolysaccharide (LPS) in a p38 MAPK- and ERK-dependent manner (at protein level). Up-regulated strongly during epidermal repair after wounding in keratinocytes. Up-regulated strongly by epidermal growth factor (EGF) and tumor necrosis factor (TNF) in keratinocytes. Up-regulated moderately by granulocyte macrophage colony-stimulating factor (GM-CSF) and fibroblast growth factor (FGF1) in keratinocytes. Up-regulated also by glucocorticoid dexamethasone in keratinocytes. Up-regulated by LPS in a p38 MAPK-dependent manner

PMID 14766228 ↗ · PMID 15187101 ↗ · PMID 15634918 ↗ · PMID 16508015 ↗ · PMID 20166898 ↗ · PMID 27182009 ↗

開啟資料庫紀錄 ↗

情境矩陣 0 筆 · 一般功能註解 7 筆。互作清單與機器格式紀錄不列入本區。
證據分項判讀,不加總為單一可信度分數。「含實驗來源」依資料庫證據標記辨識;未逐篇核對原始方法的紀錄,不宣稱已完成實驗審查。
12 / SEQUENCE EXPLORER

核酸與蛋白質序列

完整轉錄本 · UTR / CDS 著色 · FASTA
ENST00000597629 · 1,747 nt · GRCh38
依 Ensembl exon 註解拼接的 GRCh38 參考序列,保留非編碼區。
1AGCCTGACTTCAGCGCTCCCACTCTCGGCCGACACCCCTC40
41ATGGCCAACCGTTACACCATGGATCTGACTGCCATCTACG80
81AGAGCCTCCTGTCGCTGAGCCCTGACGTGCCCGTGCCATC120
121CGACCATGGAGGGACTGAGTCCAGCCCAGGCTGGGGCTCC160
161TCGGGACCCTGGAGCCTGAGCCCCTCCGACTCCAGCCCGT200
201CTGGGGTCACCTCCCGCCTGCCTGGCCGCTCCACCAGCCT240
241AGTGGAGGGCCGCAGCTGTGGCTGGGTGCCCCCACCCCCT280
281GGCTTCGCACCGCTGGCTCCCCGCCTGGGCCCTGAGCTGT320
321CACCCTCACCCACTTCGCCCACTGCAACCTCCACCACCCC360
361CTCGCGCTACAAGACTGAGCTATGTCGGACCTTCTCAGAG400
401AGTGGGCGCTGCCGCTACGGGGCCAAGTGCCAGTTTGCCC440
441ATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAA480
481ATACAAGACGGAACTCTGTCACAAGTTCTACCTCCAGGGC520
521CGCTGCCCCTACGGCTCTCGCTGCCACTTCATCCACAACC560
561CTAGCGAAGACCTGGCGGCCCCGGGCCACCCTCCTGTGCT600
601TCGCCAGAGCATCAGCTTCTCCGGCCTGCCCTCTGGCCGC640
641CGGACCTCACCACCACCACCAGGCCTGGCCGGCCCTTCCC680
681TGTCCTCCAGCTCCTTCTCGCCCTCCAGCTCCCCACCACC720
721ACCTGGGGACCTTCCACTGTCACCCTCTGCCTTCTCTGCT760
761GCCCCTGGCACCCCCCTGGCTCGAAGAGACCCCACCCCAG800
801TCTGTTGCCCCTCCTGCCGAAGGGCCACTCCTATCAGCGT840
841CTGGGGGCCCTTGGGTGGCCTGGTTCGGACCCCCTCTGTA880
881CAGTCCCTGGGATCCGACCCTGATGAATATGCCAGCAGCG920
921GCAGCAGCCTGGGGGGCTCTGACTCTCCCGTCTTCGAGGC960

cDNA 使用 DNA 字母 T;mRNA 模式改以 U 顯示。轉錄本保留已註解的非編碼區,未另外加入 poly(A) 尾;非編碼 RNA 的參考轉錄本也可能仍需後續加工。數字為所選序列的 1-based 位置。長序列以黃色捲軸瀏覽,可複製或下載完整轉錄本與蛋白質;基因組 DNA 隨捲動取得所需範圍。