基因總覽
STIP1 homology and U-box containing protein 1 是由 STUB1 編碼的蛋白質,屬於 E3 ubiquitin-protein ligase,亦稱 CHIP。它兼具分子伴護蛋白協同因子與泛素化調節者的角色,能參與處理蛋白質品質控制相關底物。蛋白質序列包含三個 TPR repeats 與位於末端區域的 U-box domain;此外,部分 N 端區域被註記為無序區。這些結構特徵與其和伴護蛋白及泛素化系統的互動相符。
基因異名與舊稱
異名取自 HGNC,可能包含歷史名稱;蛋白質名稱以 UniProt 註解為準。
染色體位置與基因結構
查看實際轉錄本與 exon 註解
| Transcript | Genomic coordinates | Exons |
|---|---|---|
| ENST00000219548 ★ | 680,410–682,801 | 7 |
| ENST00000880076 | 679,980–682,802 | 7 |
| ENST00000880077 | 679,980–682,802 | 7 |
| ENST00000880078 | 679,980–682,802 | 7 |
| ENST00000880079 | 679,980–682,802 | 7 |
| ENST00000917532 | 679,980–682,802 | 4 |
| ENST00000965393 | 679,980–682,802 | 7 |
| ENST00001134547 | 679,980–682,802 | 7 |
| ENST00000565677 | 680,224–682,802 | 7 |
| ENST00000567173 | 680,424–682,193 | 6 |
| ENST00000564370 | 681,037–682,802 | 6 |
| ENST00000566408 | 681,276–682,462 | 5 |
顯示 12/13 個蛋白質編碼轉錄本;canonical 優先。
帶型與著絲點依 Ensembl 座標繪製;核染色體長度以 GRCh38 第 1 號染色體為共同尺度。黃色標記表示本基因位置,細小區間加粗以利辨識;實際基因長度與 exon 見下方資料。
分子功能與生物學過程
STUB1 的主要功能之一,是將錯誤摺疊的分子伴護蛋白底物導向蛋白酶體降解。它也能調節 Hsp70、Hsc70 與 Hsp90 等伴護蛋白複合體的活性,並作為 HSPA1A、HSPA1B 的協同伴護因子,促進泛素介導的蛋白質降解。與 ATXN3 協同時,STUB1 參與錯誤摺疊底物的處理;ATXN3 可限制附著於 STUB1 底物的泛素鏈長,避免鏈進一步延長。另一方面,STUB1 也能將非典型短泛素鏈轉移至 HSPA8,但這些修飾不會促使 HSPA8 降解。
STUB1 的作用不只限於伴護蛋白底物。它會泛素化多種蛋白質,並依底物與修飾方式影響其穩定性或後續處理。例如,STUB1 可促進 DNA polymerase beta(POLB)在 Lys-41、Lys-61 與 Lys-81 位點形成多聚泛素化;此作用放大 HUWE1/ARF-BP1 介導的單泛素化,並使 POLB 被蛋白酶體降解,參與鹼基切除修復相關調節。STUB1 也可泛素化 CYP3A4、EPHA2、NOS1 與 CHRNA3;其中 CHRNA3 在皮質神經元中被導向內質網相關降解。對 SIRT6 而言,STUB1 介導的單泛素化則可避免其遭蛋白酶體降解。
在細胞壓力與細胞存活調節上,STUB1 被描述為參與維持粒線體形態,並促進功能失常粒線體的粒線體自噬清除;依相似性推論,這可能有助於細胞在壓力下抵抗細胞凋亡。心肌細胞中,STUB1 可降解 FOXO1,降低 FOXO1 介導的促凋亡基因轉錄,並促進心臟平滑肌細胞存活與增殖。它也可降解 CREM 的 ICER 型異構型,作為 MAPK/ERK 抑制心肌細胞凋亡的正向效應因子;此外,對 NFATC3 的泛素化與蛋白酶體降解,與抑制脂多醣誘發的心肌細胞凋亡和肥大有關。
STUB1 對不同細胞與訊息路徑的影響並不相同。它可藉由降解 MYOCD,降低血管平滑肌收縮相關基因的轉錄;在調節性 T 細胞中,則可依賴 HSPA1A/B 泛素化並降解 FOXP3,負向調節其發炎期間的抑制功能。STUB1 也被報告參與 SMAD3、TP53、ESR1、RIPK1 與 RIPK3 等蛋白質的調節;例如 RIPK1 與 RIPK3 的泛素化會導向溶酶體依賴性降解,並使 STUB1 具有抑制程序性壞死的作用。
Promoter 與基因調控
>STUB1 ENST00000219548 GRCh38 chr16:679410-680510 strand=1 5′→3′ 相對 TSS:-1000 到 +100 bp;1101 bp 依轉錄本 TSS 擷取的基因組序列;TSS = 0,兩端包含,未驗證為 promoter AGGGAGGCCCCGCCCCCACTGGAGACACCCGCCCCGCCGATGCCACGCCCCAATGAAGACCCGCGCTACG GAGGCCCTGCCCTCGGGGCGGGCCGCCCTTCACAGTCAAGCTGCCAGGCCAGCAGCCGCTCCAGCTCCCT GTCACATGCTTCTCTGCTCTGCCCCTGATGGCCGCTGGCAACTCTTCCCGATACCTGAGGAAGGGCGGTG AGGGGAGGACTGGCCACGGAGGACGCTCGCCCCACCGATCTCTATCCCCTTCCACTCTACCAACAGTCCG GGGCTTCCAGCCGCCCTCGGGGGCTCGCGCTCGCCCGTAGCACCTCTCGTGGCGCTCCAGAATGGCAGCC CAGCGACTGGGGTCCTCACACCCCACAGCGCGTGGGAAGCCGCTACGTTCACGCGCAGGGGCGGGAGGCG GCGGCTGGGGGCGGGGCCTCTGCTGATGGGGCCGGGTGCTGGGGGCGGGGCCTCTGGATTGGGCGGTTGC TGGGGGCGGGGCCTCTGCGGATGGGGCTGGGGGCGGGGCCTCTGCTGATGGGGCCGGCGGCTGGGGGCGG GGCCTCTGGATTGGGCGGCTGCTGGGGGCGGGGCCTCTGCGGATGGGGCCGGCTGCTGGGGGCGGGGCCT CTGGATGGGGCCGGCTGCCGGGGGAGGGGTCTCTGCGCGTTGGGACAGGGGCGGAACCCCAGGTGGTCGG GACAGGCTGTTGCGGGAGCGCGCCCTCAGCGAAGCAAGTGAGGCATCTCACTGGGAAAGTCGAATGTGTG TGGCGGCCGCCGCCGAGGCGGGTTCCGAAGAGACCTCAGCAGGGCAGGCCAGGGCCTACGCGAACGCCCA CCCTTAAGAGCGCGGGGACAGGGAACTGGAGCGTTCCTCCCAGCCCCCGACGTCGCGGGCCCAGTGTCCC CGTCCAGGCTGGTTGGGCGCACGCGCGGCCCCACTCGCCCCCACGCGTGCGTCCCCGCTGGTCCCGCCCC CGGCCGGAAGTTCCGGCGGCGGAGCTGGGCCGGGCCCGAGCGGATCGCGGGCTCGGGCTGCGGGGCTCCG GCTGCGGGCGCTGGGCCGCGAGGCGCGGAGCTTGGGAGCGGAGCCCAGGCC
EPDnew 實驗支持 promoter/TSS · 2 筆
| EPDnew ID | TSS(1-based) | 股向 | 來源顯示區間 |
|---|---|---|---|
| STUB1_2 ↗ | 16:680,081 | 正股 | 680,032–680,091 |
| STUB1_1 ↗ | 16:680,410 | 正股 | 680,361–680,420 |
EPDnew human v006 · UCSC hg38,GRCh38/hg38,透過 UCSC 取得。TSS 具有 CAGE/RAMPAGE 等實驗資料支持;任意擷取的上下游區間仍需另行判讀調控功能,不能視為整段皆經功能驗證。
EPD 封存狀態 ↗ · UCSC 資料說明 ↗ · EPD team, SIB Swiss Institute of Bioinformatics; UCSC Genome Browser · CC BY 4.0
查看已取得的調控/motif 註解
ENSR16_B5LQ · promoter · 675181–676085 · regulatory
ENSR16_999J · promoter · 679009–679509 · regulatory
ENSR16_999M · enhancer · 679510–679774 · regulatory
ENSR16_B5MD · promoter · 679775–680420 · regulatory
ENSR16_999Z · promoter · 680547–681047 · regulatory
ENSR16_56BRC · CTCF_binding_site · 681113–681134 · regulatory
ENSR16_B5N3 · promoter · 684324–684853 · regulatory
· motif · 675619–675636 · motif
· motif · 677537–677546 · motif
· motif · 678310–678319 · motif
· motif · 678380–678389 · motif
· motif · 678385–678397 · motif
· motif · 678387–678394 · motif
· motif · 678416–678425 · motif
· motif · 678481–678490 · motif
· motif · 679726–679739 · motif
· motif · 680242–680255 · motif
· motif · 680335–680346 · motif
· motif · 680335–680346 · motif
· motif · 680361–680372 · motif
· motif · 680361–680372 · motif
· motif · 680382–680395 · motif
· motif · 680390–680401 · motif
· motif · 680392–680401 · motif
· motif · 681115–681131 · motif
· motif · 683979–683991 · motif
· motif · 683981–683988 · motif
· motif · 684193–684202 · motif
· motif · 684193–684202 · motif
· motif · 684195–684207 · motif
· motif · 684198–684205 · motif
· motif · 684396–684411 · motif
· motif · 684396–684411 · motif
· motif · 684429–684440 · motif
· motif · 684429–684440 · motif
· motif · 684431–684440 · motif
· motif · 684521–684536 · motif
· motif · 684521–684536 · motif
在調節性 T 細胞(Treg)中,發炎訊號會提高 STUB1 的表現。
蛋白質結構域與序列
參考蛋白質長度:303 aa
STUB1 蛋白質長 303 個胺基酸,含有三個 TPR repeats(第 26–127 位)及位於第 226–300 位的 U-box domain;第 1–30 位被註記為無序區。第 101–200 位是與 MAPK7 互作所需區域;第 142–196 位與 MYOCD 的互作及泛素化有關。對 FOXO1 而言,第 143–197 位是互作所需區域,第 143–303 位則是其泛素化所需區域。
蛋白質三維結構
細胞內定位
STUB1 可位於細胞質、細胞核與粒線體。 在調節性 T 細胞中,發炎訊號會促使其轉移至細胞核;氧與葡萄糖缺乏引發的細胞壓力後,則可定位至粒線體,此定位描述為依相似性推論。
深綠色圓點:來源記載的蛋白質定位;數量不表示含量。
動物細胞結構示意;器官大小與數量不按比例。點選細胞構造可查看定位註解。
交互作用與訊號網絡
拖曳節點後放開可帶動位置變化;點選夥伴查看證據。位置與連線長度不代表結合強度,圖中未推定夥伴彼此之間的關係。
更多交互作用夥伴 · 已取得 72 個夥伴
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- ALS2A0A0S2Z5Q7 · UniProt INTERACTION · 3 experiments
- ATCAYQ86WG3 · UniProt INTERACTION · 4 experiments
- BAG1Q99933 · UniProt INTERACTION · 2 experiments
- BAG2O95816 · UniProt INTERACTION · 6 experiments
- BAG3O95817 · UniProt INTERACTION · 3 experiments
- BSCL2J3KQ12 · UniProt INTERACTION · 3 experiments
- CAMK2AQ9UQM7 · UniProt INTERACTION · 3 experiments
- CCL28Q9NRJ3 · UniProt INTERACTION · 3 experiments
- CISD2Q8N5K1 · UniProt INTERACTION · 3 experiments
- COL25A1Q8NE08 · UniProt INTERACTION · 3 experiments
- COMTP21964-2 · UniProt INTERACTION · 3 experiments
- CYTH1Q15438 · UniProt INTERACTION · 3 experiments
- DAPK1P53355 · UniProt INTERACTION · 2 experiments
- DMWDG5E9A7 · UniProt INTERACTION · 3 experiments
- DNAAF4Q8WXU2-2 · UniProt INTERACTION · 3 experiments
- E2F8A0AVK6 · UniProt INTERACTION · 3 experiments
- EGFRP00533 · UniProt INTERACTION · 4 experiments
- EXOC5O00471 · UniProt INTERACTION · 3 experiments
- FKBP6O75344 · UniProt INTERACTION · 3 experiments
- FOXP3Q9BZS1 · UniProt INTERACTION · 7 experiments
- FYNP06241 · UniProt INTERACTION · 3 experiments
- GALP22466 · UniProt INTERACTION · 3 experiments
STUB1 可形成同源二聚體,並與多種分子伴護蛋白及泛素系統成員互作,包括 HSPA8、HSPA1A、HSP90、UBE2D1–UBE2D3、UBE2N 與 UBE2V1。它也是 CASA 複合體的成員,該複合體包含 BAG3、HSPA8/HSC70、HSPB8 與 STUB1/CHIP。另有由 STUB1、VCP/p97、CHRNA3 與 UBXN2A 組成的複合體參與 CHRNA3 的泛素化與內質網相關降解;在此複合體中,UBXN2A 作為支架促進 CHRNA3 與 VCP/p97 互作,而此互作也會抑制 STUB1 對 CHRNA3 的泛素化及後續降解。
疾病與遺傳關聯
STUB1 的變異與兩種脊髓小腦性共濟失調相關。常染色體隱性第 16 型(SCAR16)可呈現軀幹與肢體共濟失調、步態不穩,也可能伴隨構音障礙、眼球震顫、下肢痙攣及輕度周邊感覺神經病變。第 48 型(SCA48)為常染色體顯性神經退化疾病,通常於成年中期發病,特徵包括進行性認知衰退、步態共濟失調,以及小腦蚓部與半球萎縮。這些資料描述的是影響 STUB1 的變異與疾病的關聯。
Contextual Functional Evidence Matrix
矩陣以「功能主張」為列,以細胞情境、干預條件、量測結果與證據來源為欄,方便比較同一功能在不同條件下的支持情形。只有含情境與實驗資訊的紀錄會列入矩陣;一般功能註解另列於下方。
功能註解總覽 · 8 筆
| 功能面向 | 功能敘述 | 證據類型 | 可查核來源 |
|---|---|---|---|
| 功能 | STUB1 是 E3 ubiquitin-protein ligase,可將錯誤摺疊的伴護蛋白底物導向蛋白酶體降解,並調節多種伴護蛋白複合體。它參與多種底物的泛素化,對底物穩定性及細胞處理結果的影響不一;另有依相似性推論的粒線體與細胞壓力相關作用。 | 含實驗來源 | 證據與來源E3 ubiquitin-protein ligase which targets misfolded chaperone substrates towards proteasomal degradation. Plays a role in the maintenance of mitochondrial morphology and promotes mitophagic removal of dysfunctional mitochondria; thereby acts as a protector against apoptosis in response to cellular stress (By similarity). Negatively regulates vascular smooth muscle contraction, via degradation of the transcriptional activator MYOCD and subsequent loss of transcription of genes involved in vascular smooth muscle contraction (By similarity). Promotes survival and proliferation of cardiac smooth muscle cells via ubiquitination and degradation of FOXO1, resulting in subsequent repression of FOXO1-mediated transcription of pro-apoptotic genes. Ubiquitinates ICER-type isoforms of CREM and targets them for proteasomal degradation, thereby acts as a positive effector of MAPK/ERK-mediated inhibition of apoptosis in cardiomyocytes. Inhibits lipopolysaccharide-induced apoptosis and hypertrophy in cardiomyocytes, via ubiquitination and subsequent proteasomal degradation of NFATC3. Collaborates with ATXN3 in the degradation of misfolded chaperone substrates: ATXN3 restricting the length of ubiquitin chain attached to STUB1/CHIP substrates and preventing further chain extension. Ubiquitinates NOS1 in concert with Hsp70 and Hsp40. Modulates the activity of several chaperone complexes, including Hsp70, Hsc70 and Hsp90. Ubiquitinates CHRNA3 targeting it for endoplasmic reticulum-associated degradation in cortical neurons, as part of the STUB1-VCP-UBXN2A complex. Ubiquitinates and promotes ESR1 proteasomal degradation in response to age-related circulating estradiol (17-beta-estradiol/E2) decline, thereby promotes neuronal apoptosis in response to ischemic reperfusion injury (By similarity). Mediates transfer of non-canonical short ubiquitin chains to HSPA8 that have no effect on HSPA8 degradation. Mediates polyubiquitination of DNA polymerase beta (POLB) at 'Lys-41', 'Lys-61' and 'Lys-81', thereby playing a role in base-excision repair: catalyzes polyubiquitination by amplifying the HUWE1/ARF-BP1-dependent monoubiquitination and leading to POLB-degradation by the proteasome. Mediates polyubiquitination of CYP3A4. Ubiquitinates EPHA2 and may regulate the receptor stability and activity through proteasomal degradation. Acts as a co-chaperone for HSPA1A and HSPA1B chaperone proteins and promotes ubiquitin-mediated protein degradation. Negatively regulates the suppressive function of regulatory T-cells (Treg) during inflammation by mediating the ubiquitination and degradation of FOXP3 in a HSPA1A/B-dependent manner. Catalyzes monoubiquitination of SIRT6, preventing its degradation by the proteasome. Likely mediates polyubiquitination and down-regulates plasma membrane expression of PD-L1/CD274, an immune inhibitory ligand critical for immune tolerance to self and antitumor immunity. Negatively regulates TGF-beta signaling by modulating the basal level of SMAD3 via ubiquitin-mediated degradation. Plays a role in the degradation of TP53. Acts as an inhibitor of necroptosis by mediating ubiquitination of RIPK1 and RIPK3 leading to their subsequent lysosome-dependent degradation. May regulate myosin assembly in striated muscles together with UBE4B and VCP/p97 by targeting myosin chaperone UNC45B for proteasomal degradation. Ubiquitinates PPARG in macrophages playing a role in M2 macrophages polarization and angiogenesis (By similarity) PMID 10330192 ↗ · PMID 11146632 ↗ · PMID 11557750 ↗ · PMID 15466472 ↗ · PMID 17369820 ↗ · PMID 19103148 ↗ · PMID 19483080 ↗ · PMID 19567782 ↗ · PMID 19713937 ↗ · PMID 20724525 ↗ · PMID 23973223 ↗ · PMID 23990462 ↗ · PMID 24043303 ↗ · PMID 24613385 ↗ · PMID 26265139 ↗ · PMID 26634371 ↗ · PMID 26900751 ↗ · PMID 27708256 ↗ · PMID 28813410 ↗ · PMID 29883609 ↗ · PMID 30980393 ↗ |
| 分子活性 | S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine. | 含實驗來源 | 證據與來源S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine. PMID 11557750 ↗ · PMID 15466472 ↗ · PMID 24043303 ↗ |
| 分子活性 | STUB1 參與蛋白質修飾,具體包括蛋白質泛素化。 | 資料庫紀錄 | |
| 交互作用 | STUB1 可形成同源二聚體,並與伴護蛋白、E2 ubiquitin-conjugating enzymes 及多種調控蛋白互作,也參與 CASA 複合體。它與 VCP/p97、CHRNA3、UBXN2A 組成的複合體調節 CHRNA3 泛素化及內質網相關降解;其中 UBXN2A 促成 CHRNA3 與 VCP/p97 的互作,且該互作會抑制 STUB1 對 CHRNA3 的泛素化及後續降解。 | 含實驗來源 | 證據與來源Homodimer (By similarity). Interacts with BAG2. Interacts with E2 ubiquitin conjugating enzymes UBE2D1, UBE2D2 and UBE2D3. Detected in a ternary complex containing STUB1, HSPA1A and HSPBP1. Part of a complex composed of STUB1/CHIP, VCP/p97, CHRNA3, and UBXN2A that modulates the ubiquitination and endoplasmic reticulum-associated degradation (ERAD) of CHRNA3. Within the complex UBXN2A acts as a scaffold protein required for the interaction of CHRNA3 with VCP/p97, this interaction also inhibits CHRNA3 ubiquitination by STUB1/CHIP and subsequently ERAD. Interacts with MKKS. Interacts with DNAAF4. Interacts (when monoubiquitinated) with ATXN3. Interacts with UBE2W. Interacts (via the U-box domain) with the UBE2V2-UBE2N heterodimer; the complex has a specific 'Lys-63'-linked polyubiquitination activity (By similarity). Interacts with DNAJB6. Interacts with FLCN. Interacts with HSP90AA1. Interacts with HSP90. Interacts with UBE2N and UBE2V1. Interacts (via TPR repeats) with HSPA8 (via C-terminus). Interacts (via TPR repeats) with HSPA1A (via C-terminus). Interacts with the non-acetylated form of HSPA1A and HSPA1B. Interacts with SMAD3 and HSP90AB1. Interacts with UBE4B. Interacts with PRMT5. Interacts with MYOCD (via C-terminus) (By similarity). Interacts with FOXO1 (when phosphorylated on 'Ser-256'). Interacts with MAPK7/ERK5; the interaction is enhanced in the presence of IGF1 or MAP2K5 and promotes STUB1/CHIP E3 ligase activity. Interacts with and ubiquitinates ESR1; the interaction is promoted in the absence of estradiol (17-beta-estradiol/E2) (By similarity). Interacts with ESR2 (By similarity). Interacts with and ubiquitinates NFATC3; HSPA1A/HSP70 is required as a co-chaperone. In macrophages, interacts with PAQR3; the interaction promotes PPARG poylubiquitination and STUB1-mediated degradation (By similarity). Component of the chaperone-assisted selective autophagy (CASA) complex consisting of BAG3, HSPA8/HSC70, HSPB8 and STUB1/CHIP PMID 10330192 ↗ · PMID 11146632 ↗ · PMID 11557750 ↗ · PMID 15215316 ↗ · PMID 16169850 ↗ · PMID 16307917 ↗ · PMID 17369820 ↗ · PMID 18094050 ↗ · PMID 19423554 ↗ · PMID 19483080 ↗ · PMID 19713937 ↗ · PMID 20060297 ↗ · PMID 20724525 ↗ · PMID 22366786 ↗ · PMID 23990462 ↗ · PMID 24613385 ↗ · PMID 26265139 ↗ · PMID 27353360 ↗ · PMID 27708256 ↗ · PMID 30980393 ↗ |
| 細胞定位 | STUB1 可見於細胞質、細胞核與粒線體。在調節性 T 細胞中,發炎訊號會促使其轉移至細胞核;在氧與葡萄糖缺乏引起的細胞壓力後,則定位至粒線體,後者為依相似性推論。 | 含實驗來源 | 證據與來源Cytoplasm; Nucleus; Mitochondrion; Translocates to the nucleus in response to inflammatory signals in regulatory T-cells (Treg). Localizes to mitochondria following oxygen and glucose deprivation-induced cellular stress (By similarity) PMID 10330192 ↗ · PMID 17369820 ↗ · PMID 23973223 ↗ |
| 調控 | 在調節性 T 細胞(Treg)中,發炎訊號會提高 STUB1 的表現。 | 含實驗來源 | |
| 疾病關聯 | STUB1 變異與常染色體隱性脊髓小腦性共濟失調第 16 型(SCAR16)相關。患者可有軀幹與肢體共濟失調、步態不穩,也可能出現構音障礙、眼球震顫、下肢痙攣及輕度周邊感覺神經病變;此病屬於具臨床與遺傳異質性的小腦疾病群。 | 含實驗來源 | 證據與來源Spinocerebellar ataxia, autosomal recessive, 16 SCAR16 A form of spinocerebellar ataxia, a clinically and genetically heterogeneous group of cerebellar disorders. Patients show progressive incoordination of gait and often poor coordination of hands, speech and eye movements, due to degeneration of the cerebellum with variable involvement of the brainstem and spinal cord. SCAR16 is characterized by truncal and limb ataxia resulting in gait instability. Additionally, patients may show dysarthria, nystagmus, spasticity of the lower limbs, and mild peripheral sensory neuropathy. The disease is caused by variants affecting the gene represented in this entry MIM: 615768 PMID 24113144 ↗ · PMID 24312598 ↗ · PMID 24719489 ↗ · PMID 24742043 ↗ · PMID 25258038 ↗ |
| 疾病關聯 | STUB1 變異與脊髓小腦性共濟失調第 48 型(SCA48)相關。此病為常染色體顯性神經退化疾病,通常在成年中期發病,呈現進行性認知衰退與步態共濟失調,並有小腦蚓部及半球萎縮;脊髓小腦性共濟失調整體屬具臨床與遺傳異質性的疾病群。 | 含實驗來源 | 證據與來源Spinocerebellar ataxia 48 SCA48 A form of spinocerebellar ataxia, a clinically and genetically heterogeneous group of cerebellar disorders. Patients show progressive incoordination of gait and often poor coordination of hands, speech and eye movements, due to degeneration of the cerebellum with variable involvement of the brainstem and spinal cord. SCA48 is an autosomal dominant neurodegenerative disease characterized by onset in mid-adulthood of progressive cognitive decline and gait ataxia, and vermian and hemispheric cerebellar atrophy. The disease is caused by variants affecting the gene represented in this entry MIM: 618093 PMID 30381368 ↗ |
核酸與蛋白質序列
GGAGCTGGGCCGGGCCCGAGCGGATCGCGGGCTCGGGCTG40CGGGGCTCCGGCTGCGGGCGCTGGGCCGCGAGGCGCGGAG80CTTGGGAGCGGAGCCCAGGCCGTGCCGCGCGGCGCCATGA120AGGGCAAGGAGGAGAAGGAGGGCGGCGCACGGCTGGGCGC160TGGCGGCGGAAGCCCCGAGAAGAGCCCGAGCGCGCAGGAG200CTCAAGGAGCAGGGCAATCGTCTGTTCGTGGGCCGAAAGT240ACCCGGAGGCGGCGGCCTGCTACGGCCGCGCGATCACCCG280GAACCCGCTGGTGGCCGTGTATTACACCAACCGGGCCTTG320TGCTACCTGAAGATGCAGCAGCACGAGCAGGCCCTGGCCG360ACTGCCGGCGCGCCCTGGAGCTGGACGGGCAGTCTGTGAA400GGCGCACTTCTTCCTGGGGCAGTGCCAGCTGGAGATGGAG440AGCTATGATGAGGCCATCGCCAATCTGCAGCGAGCTTACA480GCCTGGCCAAGGAGCAGCGGCTGAACTTCGGGGACGACAT520CCCCAGCGCTCTTCGAATCGCGAAGAAGAAGCGCTGGAAC560AGCATTGAGGAGCGGCGCATCCACCAGGAGAGCGAGCTGC600ACTCCTACCTCTCCAGGCTCATTGCCGCGGAGCGTGAGAG640GGAGCTGGAAGAGTGCCAGCGAAACCACGAGGGTGATGAG680GACGACAGCCACGTCCGGGCCCAGCAGGCCTGCATTGAGG720CCAAGCACGACAAGTACATGGCGGACATGGACGAGCTTTT760TTCTCAGGTGGATGAGAAGAGGAAGAAGCGAGACATCCCC800GACTACCTGTGTGGCAAGATCAGCTTTGAGCTGATGCGGG840AGCCGTGCATCACGCCCAGTGGCATCACCTACGACCGCAA880GGACATCGAGGAGCACCTGCAGCGTGTGGGTCATTTTGAC920CCCGTGACCCGGAGCCCCCTGACCCAGGAACAGCTCATCC960cDNA 使用 DNA 字母 T;mRNA 模式改以 U 顯示。轉錄本保留已註解的非編碼區,未另外加入 poly(A) 尾;非編碼 RNA 的參考轉錄本也可能仍需後續加工。數字為所選序列的 1-based 位置。長序列以黃色捲軸瀏覽,可複製或下載完整轉錄本與蛋白質;基因組 DNA 隨捲動取得所需範圍。