基因總覽
SQSTM1 是蛋白質編碼基因,其產物 sequestosome 1 為 440 個胺基酸的蛋白質。蛋白質包含 PB1、ZZ-type zinc finger 與 UBA 結構域,並具有多段無序區域及可與不同分子互動的功能區段。這些結構特色使 sequestosome 1 能在細胞內作為分子接頭,參與蛋白質聚集體與細胞器相關的調控過程;其主要角色之一是協助選擇性巨自噬處理泛素化蛋白質。
基因異名與舊稱
異名取自 HGNC,可能包含歷史名稱;蛋白質名稱以 UniProt 註解為準。
染色體位置與基因結構
查看實際轉錄本與 exon 註解
| Transcript | Genomic coordinates | Exons |
|---|---|---|
| ENST00000389805 ★ | 179,820,905–179,838,078 | 8 |
| ENST00000514093 | 179,806,408–179,825,226 | 6 |
| ENST00000422245 | 179,818,878–179,824,323 | 4 |
| ENST00000510187 | 179,820,858–179,837,218 | 7 |
| ENST00000884698 | 179,820,858–179,838,078 | 8 |
| ENST00000884699 | 179,820,858–179,838,078 | 5 |
| ENST00000884700 | 179,820,858–179,837,254 | 8 |
| ENST00000884701 | 179,820,858–179,837,254 | 4 |
| ENST00000884702 | 179,820,858–179,837,254 | 7 |
| ENST00000884703 | 179,820,858–179,837,253 | 8 |
| ENST00000884704 | 179,820,858–179,837,252 | 6 |
| ENST00000884705 | 179,820,858–179,837,248 | 2 |
顯示 12/20 個蛋白質編碼轉錄本;canonical 優先。
帶型與著絲點依 Ensembl 座標繪製;核染色體長度以 GRCh38 第 1 號染色體為共同尺度。黃色標記表示本基因位置,細小區間加粗以利辨識;實際基因長度與 exon 見下方資料。
分子功能與生物學過程
sequestosome 1 是選擇性巨自噬(又稱 aggrephagy)的分子接頭,協助將泛素化貨物帶到自噬體。它透過不同區域在多個步驟連結蛋白質與細胞器,因而參與辨識、聚集及清除泛素化蛋白質的過程。
在此過程中,sequestosome 1 先以 UBA 結構域結合泛素化蛋白質,並藉由液-液相分離形成不溶性的細胞質包涵體,即 p62 bodies。之後,蛋白質上的 LIR motif 與自噬體上的 ATG8 family proteins 互動,使 p62 bodies 被帶往自噬體,讓其中的泛素化蛋白質得以接受自噬清除;sequestosome 1 本身也會隨貨物一同降解。它亦可協助將泛素化蛋白質募集至細胞核內的 PML bodies。
在活性氧(ROS)刺激下,sequestosome 1 參與過氧化體自噬(pexophagy),作為泛素化 PEX5 receptor 與自噬體之間的橋接者。它也促進帶有 Lys-63 連結泛素鏈的 STING1 轉位至自噬體。
此外,sequestosome 1 可透過與 KEAP1 互動活化 NFE2L2/NRF2 pathway:它將 BCR(KEAP1) complex 隔離於包涵體,使該複合體失活,促進 NFE2L2/NRF2 在細胞核累積,並進一步促使細胞保護基因表現。它也參與胞內體組織;RNF26 使其泛素化後,sequestosome 1 可招募特定囊泡相關接頭蛋白,將相應囊泡留在核周區域,協助胞內體路徑組織與貨物運輸。來源另指出,它可能參與 TNF、NGF 與 interleukin-1 誘發的 NFKB1 活化調節,以及肌肉細胞中的 titin/TTN 下游訊號。
Promoter 與基因調控
>SQSTM1 ENST00000389805 GRCh38 chr5:179819905-179821005 strand=1 5′→3′ 相對 TSS:-1000 到 +100 bp;1101 bp 依轉錄本 TSS 擷取的基因組序列;TSS = 0,兩端包含,未驗證為 promoter TCCCCTGGGAGGTTTCTCCAGCTCCTGCAAGCCCTGGGCTGAAATGGCATGAGTTGGACCCAGCAGGTTC TGACCTCCTACTCACAGGACCTTGCCTGGGAGGCTCCAGAGGGTGACCACTCGTCCTGCCCCTCTCCTTG CCCCAGTTCTGGCGGACAGGTTACTCTGGTGGCATAAAGCAGTGTTTCTTCCTTCCTAGCTGAGGAGGCT GTTGGCTGACCCCCTTGGCTGCCCACAAGGCCAACGGGCCTGAGCCCCCACAGGGCCATGGGCATTACCT GCTGAATTGAGGAGCCCATAAGGAGTCACTTGGACCACAGTGAACACTTGGCGACCACTGACACTCAGGA GACCTTAGCTGGTCCTCCAGCACCTCTCAACTCCACTCCTACTAAACTGGGAACTTCTCTGGTGCTCAGG CCAGAGTCGGGGTCCGTCACCGAGTATGCTATGCGCTGCCCATCACCGAGGATGCCATGCGCTGTAAGAG GGCTGCCACCGCGGCAGGCTGACCATGGCAGGGTCGGAACAGCAACCTGAGAGCCAGCTTGTTCTGGCCA GCAGTGCCCACTGGGCGACCTAGCAGCCTCCTGATATGGGGGCTGTGTCCCCCTCTCCCTGCACTGGGTA CCCCCAACTGAGGATATTGCTGAGTCATGGCCAGGCCCAAGCCTGGGAGGGGCGAGGGGCTGGACCCCCG CCAGTACCCTGATCCCAGGTGCAGAGGCTGGAGCCCAGGCCTGTATGAGTGCCAGGGCCGGTTTCCTGGG GTCCTTGGTGCACCGGGGCAATGAAGAGAGGGGTCAGCAATGAGGGGGCCGGGAGACCTGGAGCGAGGGG TAGCGGGGAAGGGGAGAGTAGTGAAGGGGCCTCTGCAGGGCGGCTCTCGCGCCGCGACGACGGTGGCGGG GGCGGGGAGGGCGCGAGAGACTCCGCCCCTCTCGAGGCGGGGCGGGGCCTCCGCGTTCGCTACAAAAGCC GCGCGGCGGCTGCGACCGGGACGGCCCGTTTTCCGCCAGCTCGCCGCTCGCTATGGCGTCGCTCACCGTG AAGGCCTACCTTCTGGGCAAGGAGGACGCGGCGCGCGAGATTCGCCGCTTC
EPDnew 實驗支持 promoter/TSS · 2 筆
| EPDnew ID | TSS(1-based) | 股向 | 來源顯示區間 |
|---|---|---|---|
| SQSTM1_2 ↗ | 5:179,806,404 | 正股 | 179,806,355–179,806,414 |
| SQSTM1_1 ↗ | 5:179,820,905 | 正股 | 179,820,856–179,820,915 |
EPDnew human v006 · UCSC hg38,GRCh38/hg38,透過 UCSC 取得。TSS 具有 CAGE/RAMPAGE 等實驗資料支持;任意擷取的上下游區間仍需另行判讀調控功能,不能視為整段皆經功能驗證。
EPD 封存狀態 ↗ · UCSC 資料說明 ↗ · EPD team, SIB Swiss Institute of Bioinformatics; UCSC Genome Browser · CC BY 4.0
查看已取得的調控/motif 註解
ENSR5_CMSQL · enhancer · 179816486–179817761 · regulatory
ENSR5_53K9XTT · CTCF_binding_site · 179817372–179817393 · regulatory
ENSR5_CMSQP · enhancer · 179817870–179819394 · regulatory
ENSR5_B3BNJP · promoter · 179820395–179820931 · regulatory
ENSR5_94MD4M · promoter · 179821128–179821628 · regulatory
ENSR5_53K9ZJP · CTCF_binding_site · 179821223–179821244 · regulatory
ENSR5_53K9ZL5 · CTCF_binding_site · 179821528–179821549 · regulatory
ENSR5_94MD4W · promoter · 179821995–179822495 · regulatory
ENSR5_879Q8K · enhancer · 179823532–179823661 · regulatory
ENSR5_94MD5Z · enhancer · 179825720–179826210 · regulatory
· motif · 179816735–179816744 · motif
· motif · 179816742–179816749 · motif
· motif · 179817111–179817118 · motif
· motif · 179817197–179817209 · motif
· motif · 179817200–179817207 · motif
· motif · 179817374–179817390 · motif
· motif · 179818063–179818076 · motif
· motif · 179818326–179818339 · motif
· motif · 179818584–179818597 · motif
· motif · 179818584–179818597 · motif
· motif · 179818673–179818680 · motif
· motif · 179818779–179818790 · motif
· motif · 179819003–179819010 · motif
· motif · 179819014–179819024 · motif
· motif · 179819025–179819035 · motif
· motif · 179819035–179819048 · motif
· motif · 179819040–179819052 · motif
· motif · 179819088–179819101 · motif
· motif · 179819088–179819101 · motif
· motif · 179819124–179819139 · motif
· motif · 179819129–179819141 · motif
· motif · 179819132–179819139 · motif
· motif · 179819189–179819198 · motif
· motif · 179819189–179819200 · motif
· motif · 179819216–179819226 · motif
· motif · 179819226–179819243 · motif
· motif · 179819321–179819331 · motif
· motif · 179819323–179819333 · motif
· motif · 179819326–179819336 · motif
· motif · 179819558–179819567 · motif
· motif · 179819558–179819567 · motif
· motif · 179819560–179819576 · motif
· motif · 179819560–179819576 · motif
· motif · 179819586–179819594 · motif
· motif · 179819589–179819605 · motif
· motif · 179819803–179819815 · motif
· motif · 179819806–179819819 · motif
· motif · 179819837–179819850 · motif
· motif · 179819849–179819862 · motif
· motif · 179819903–179819916 · motif
· motif · 179819903–179819916 · motif
· motif · 179819974–179819981 · motif
· motif · 179819977–179819990 · motif
· motif · 179820547–179820558 · motif
· motif · 179820551–179820565 · motif
· motif · 179820551–179820565 · motif
· motif · 179820554–179820562 · motif
· motif · 179820704–179820711 · motif
· motif · 179820807–179820820 · motif
· motif · 179821030–179821041 · motif
· motif · 179821137–179821152 · motif
· motif · 179821158–179821171 · motif
· motif · 179821225–179821241 · motif
· motif · 179821530–179821546 · motif
· motif · 179824913–179824925 · motif
· motif · 179825035–179825048 · motif
· motif · 179825040–179825052 · motif
NFE2L2/NRF2 可直接活化 SQSTM1 表現,形成正向回饋。來源亦記載,蛋白質層級的 SQSTM1 可受蛋白酶體抑制劑 PSI 與 prostaglandin J2(PGJ2)影響,並有 phorbol 12-myristate 13-acetate(PMA)相關調控紀錄。
蛋白質結構域與序列
參考蛋白質長度:440 aa
sequestosome 1 長 440 個胺基酸,含 PB1 domain(第 3–102 位)、ZZ-type zinc finger(第 123–173 位)及 UBA domain(第 389–434 位)。蛋白質另有數段無序區域,以及 LIR motif、TRAF6-binding motif 和多個互動區域;其中 MAP1LC3B-binding 區域位於第 321–342 位,KEAP1 互動區域位於第 347–352 位。
蛋白質三維結構
細胞內定位
sequestosome 1 可見於細胞質中的 p62 bodies,亦出現在自噬體等膜性構造及無膜的泛素化蛋白質聚集體。 當以 leptomycin B 阻斷核輸出時,蛋白質會累積於 PML bodies;在多種疾病相關組織中,也曾於特定蛋白質聚集體內檢出。
深綠色圓點:來源記載的蛋白質定位;數量不表示含量。
未繪示構造:Preautophagosomal structure。這些構造未在通用細胞圖中標點,仍保留來源定位名稱。
動物細胞結構示意;器官大小與數量不按比例。點選細胞構造可查看定位註解。
交互作用與訊號網絡
拖曳節點後放開可帶動位置變化;點選夥伴查看證據。位置與連線長度不代表結合強度,圖中未推定夥伴彼此之間的關係。
更多交互作用夥伴 · 已取得 51 個夥伴
- APPP05067 · UniProt INTERACTION · 6 experiments
- ATXN1P54253 · UniProt INTERACTION · 4 experiments
- BAG3O95817 · UniProt INTERACTION · 3 experiments
- CDC37Q16543 · UniProt INTERACTION · 8 experiments
- CLDN2P57739 · UniProt INTERACTION · 4 experiments
- CNR2P34972 · UniProt INTERACTION · 5 experiments
- DAZAP2Q15038 · UniProt INTERACTION · 4 experiments
- DYNC1I1O14576-2 · UniProt INTERACTION · 3 experiments
- ENC1O14682 · UniProt INTERACTION · 7 experiments
- FHOD3Q2V2M9 · UniProt INTERACTION · 6 experiments · 2 筆來源紀錄
- GABARAPO95166 · UniProt INTERACTION · 17 experiments
- GABARAPL1Q9H0R8 · UniProt INTERACTION · 18 experiments
- GABARAPL2P60520 · UniProt INTERACTION · 24 experiments
- HSPA1AP0DMV8 · UniProt INTERACTION · 3 experiments
- HTTP42858 · UniProt INTERACTION · 11 experiments
- IKBKGQ9Y6K9 · UniProt INTERACTION · 2 experiments
- KEAP1Q14145 · UniProt INTERACTION · 21 experiments
- LRRK2Q5S007 · UniProt INTERACTION · 19 experiments
- MALT1Q9UDY8 · UniProt INTERACTION · 2 experiments
- MAP1LC3AQ9H492 · UniProt INTERACTION · 16 experiments
- MAP1LC3BQ9GZQ8 · UniProt INTERACTION · 31 experiments
- MAP1LC3CQ9BXW4 · UniProt INTERACTION · 8 experiments
- MAP2K5Q13163 · UniProt INTERACTION · 5 experiments
- NBR1Q14596 · UniProt INTERACTION · 7 experiments
- NIPSNAP1Q9BPW8 · UniProt INTERACTION · 3 experiments
sequestosome 1 可形成同源或異源寡聚體,也可能排列成同型陣列;二聚化會干擾其泛素結合。它與 MAP1LC3A、MAP1LC3B 及其他 ATG8 family members 透過 LIR motif 互動,並與 PRKCZ、TRAF6、CYLD、KEAP1 等蛋白質有互動紀錄。另有多種複合體紀錄,包括與 PAWR、PRKCZ 形成三元複合體,以及與 JUB、PRKCZ、TRAF6 形成複合體。與互動關係不同,來源亦描述其與 ECSIT 的功能關係可調節 TRAF6-ECSIT complex,並抑制 TLR4 signaling。
疾病與遺傳關聯
影響 SQSTM1 的變異與 Paget disease of bone 3、frontotemporal dementia and/or amyotrophic lateral sclerosis 3、兒童發病且伴有共濟失調等表現的神經退化疾病,以及成人發病的遠端肌病相關;來源將這些疾病列為由影響該基因的變異所致。另有涉及 SQSTM1 與 NUP214 的染色體易位,見於一種急性淋巴性白血病。亨丁頓病細胞模型中,sequestosome 1 似乎可包圍突變 HTT 聚集體,且可能藉由招募自噬體成分保護細胞免於凋亡;此結果限於細胞模型,不能視為疾病因果證據。
Contextual Functional Evidence Matrix
矩陣以「功能主張」為列,以細胞情境、干預條件、量測結果與證據來源為欄,方便比較同一功能在不同條件下的支持情形。只有含情境與實驗資訊的紀錄會列入矩陣;一般功能註解另列於下方。
功能註解總覽 · 10 筆
| 功能面向 | 功能敘述 | 證據類型 | 可查核來源 |
|---|---|---|---|
| 功能 | sequestosome 1 是選擇性巨自噬的分子接頭,連結多泛素化蛋白質與自噬體。它透過 UBA 結構域結合泛素化蛋白質並進行液-液相分離,形成 p62 bodies;再以 LIR motif 與自噬體上的 ATG8 family proteins 互動,使聚集體及其貨物接受自噬清除,且 sequestosome 1 本身也會一同降解。另參與過氧化體自噬、NFE2L2/NRF2 pathway 活化、STING1 轉位與胞內體組織;對 NFKB1 調節及肌肉細胞 titin/TTN 下游訊號的作用則分別以可能性描述。 | 含實驗來源 | 證據與來源Molecular adapter required for selective macroautophagy (aggrephagy) by acting as a bridge between polyubiquitinated proteins and autophagosomes. Promotes the recruitment of ubiquitinated cargo proteins to autophagosomes via multiple domains that bridge proteins and organelles in different steps. SQSTM1 first mediates the assembly and removal of ubiquitinated proteins by undergoing liquid-liquid phase separation upon binding to ubiquitinated proteins via its UBA domain, leading to the formation of insoluble cytoplasmic inclusions, known as p62 bodies. SQSTM1 then interacts with ATG8 family proteins on autophagosomes via its LIR motif, leading to p62 body recruitment to autophagosomes, followed by autophagic clearance of ubiquitinated proteins. SQSTM1 is itself degraded along with its ubiquitinated cargos. Also required to recruit ubiquitinated proteins to PML bodies in the nucleus. Also involved in autophagy of peroxisomes (pexophagy) in response to reactive oxygen species (ROS) by acting as a bridge between ubiquitinated PEX5 receptor and autophagosomes. Acts as an activator of the NFE2L2/NRF2 pathway via interaction with KEAP1: interaction inactivates the BCR(KEAP1) complex by sequestering the complex in inclusion bodies, promoting nuclear accumulation of NFE2L2/NRF2 and subsequent expression of cytoprotective genes. Promotes relocalization of 'Lys-63'-linked ubiquitinated STING1 to autophagosomes. Involved in endosome organization by retaining vesicles in the perinuclear cloud: following ubiquitination by RNF26, attracts specific vesicle-associated adapters, forming a molecular bridge that restrains cognate vesicles in the perinuclear region and organizes the endosomal pathway for efficient cargo transport. Sequesters tensin TNS2 into cytoplasmic puncta, promoting TNS2 ubiquitination and proteasomal degradation. May regulate the activation of NFKB1 by TNF, nerve growth factor (NGF) and interleukin-1. May play a role in titin/TTN downstream signaling in muscle cells. Adapter that mediates the interaction between TRAF6 and CYLD (By similarity) PMID 10356400 ↗ · PMID 10747026 ↗ · PMID 11244088 ↗ · PMID 12471037 ↗ · PMID 15340068 ↗ · PMID 15802564 ↗ · PMID 15911346 ↗ · PMID 15953362 ↗ · PMID 16079148 ↗ · PMID 16286508 ↗ · PMID 17580304 ↗ · PMID 19931284 ↗ · PMID 20168092 ↗ · PMID 20452972 ↗ · PMID 22017874 ↗ · PMID 22622177 ↗ · PMID 24128730 ↗ · PMID 25101860 ↗ · PMID 26344566 ↗ · PMID 27368102 ↗ · PMID 28380357 ↗ · PMID 28404643 ↗ · PMID 29343546 ↗ · PMID 29496741 ↗ · PMID 29507397 ↗ · PMID 31857589 ↗ · PMID 33393215 ↗ · PMID 33472082 ↗ · PMID 33509017 ↗ |
| 交互作用 | sequestosome 1 可形成同源或異源寡聚體及同型陣列,且二聚化會干擾泛素結合。它與 ATG8 family proteins、PRKCZ、TRAF6、CYLD、KEAP1 等有互動紀錄,也參與多種複合體;部分互動具有特定條件,例如 TNF 刺激時與 RIPK1 互動,Ser-349 磷酸化時與 KEAP1 直接互動。與 WDR81 的直接互動會調節其與泛素化蛋白質的互動;與 ECSIT 的功能關係則可抑制 TLR4 signaling。 | 含實驗來源 | 證據與來源Homooligomer or heterooligomer; may form homotypic arrays. Dimerization interferes with ubiquitin binding. Component of a ternary complex with PAWR and PRKCZ. Forms a complex with JUB/Ajuba, PRKCZ and TRAF6. Identified in a complex with TRAF6 and CYLD (By similarity). Identified in a heterotrimeric complex with ubiquitin and ZFAND5, where ZFAND5 and SQSTM1 both interact with the same ubiquitin molecule. Interacts (via LIR motif) with MAP1LC3A and MAP1LC3B, as well as with other ATG8 family members, including GABARAP, GABARAPL1 and GABARAPL2; these interactions are necessary for the recruitment MAP1 LC3 family members to inclusion bodies containing polyubiquitinated protein aggregates and for their degradation by autophagy. Interacts directly with PRKCI and PRKCZ. Interacts with EBI3, LCK, RASA1, NR2F2, NTRK1, NTRK2, NTRK3, NBR1, MAP2K5 and MAPKAPK5. Upon TNF stimulation, interacts with RIPK1 probably bridging IKBKB to the TNF-R1 complex composed of TNF-R1/TNFRSF1A, TRADD and RIPK1. Interacts with the proteasome subunits PSMD4 and PSMC2. Interacts with TRAF6. Interacts with 'Lys-63'-linked polyubiquitinated MAPT/TAU. Interacts with FHOD3. Interacts with CYLD. Interacts with SESN1. Interacts with SESN2. Interacts with ULK1. Interacts with UBD. Interacts with WDR81; the interaction is direct and regulates the interaction of SQSTM1 with ubiquitinated proteins. Interacts with WDFY3; this interaction is required to recruit WDFY3 to cytoplasmic bodies and to PML bodies. Interacts with LRRC25. Interacts with STING1; leading to relocalization of STING1 to autophagosomes. Interacts (when phosphorylated at Ser-349) with KEAP1; the interaction is direct and inactivates the BCR(KEAP1) complex by sequestering KEAP1 in inclusion bodies, promoting its degradation. Interacts with MOAP1; promoting dissociation of SQSTM1 inclusion bodies that sequester KEAP1. Interacts with GBP1 (By similarity). Interacts with TAX1BP1. Interacts with (ubiquitinated) PEX5; specifically binds PEX5 ubiquitinated at 'Lys-209' in response to reactive oxygen species (ROS). Interacts (via PB1 domain) with TNS2; the interaction leads to sequestration of TNS2 in cytoplasmic aggregates with SQSTM1 and promotes TNS2 ubiquitination and proteasomal degradation. Interacts with IRS1; the interaction is disrupted by the presence of tensin TNS2. Interacts with TRIM5. Interacts with TRIM11 (when ubiquitinated); promoting AIM2 recruitment to autophagosomes and autophagy-dependent degradation of AIM2. Interacts with TRIM13. Interacts with TRIM16. Interacts with TRIM23. Interacts with TRIM50. Interacts with TRIM55. Interacts with ECSIT; this interaction inhibits TLR4 signaling via functional regulation of the TRAF6-ECSIT complex. Interacts with GABRR1, GABRR2 and GABRR3 (By similarity). Interacts with WDR83. Interacts with GRB2. Interacts with USP12; the interaction is independent of USP12 deubiquitinase activity and may be involved in regulation of autophagic flux. Interacts with ASB6. Interacts with PFN1 PMID 10356400 ↗ · PMID 10708586 ↗ · PMID 10747026 ↗ · PMID 11244088 ↗ · PMID 11755531 ↗ · PMID 12471037 ↗ · PMID 12813044 ↗ · PMID 12887891 ↗ · PMID 15340068 ↗ · PMID 15802564 ↗ · PMID 15870274 ↗ · PMID 15953362 ↗ · PMID 16286508 ↗ · PMID 17580304 ↗ · PMID 19931284 ↗ · PMID 20168092 ↗ · PMID 20357094 ↗ · PMID 20452972 ↗ · PMID 20495340 ↗ · PMID 21149568 ↗ · PMID 21923101 ↗ · PMID 22178386 ↗ · PMID 22421968 ↗ · PMID 22792322 ↗ · PMID 23274085 ↗ · PMID 24089205 ↗ · PMID 24668264 ↗ · PMID 25040165 ↗ |
| 細胞定位 | sequestosome 1 分布於細胞質、細胞核及多種膜性構造,也定位於含多泛素化蛋白質聚集體的無膜 p62 bodies;在細胞質中可見於無膜聚集體與有膜自噬體。阻斷核輸出時,它會累積於 PML bodies。來源亦記錄其與 TRIM13 在核周內質網共定位、與 TRIM5 在細胞質小體共定位,並在多種神經退化或蛋白質聚集相關疾病組織的聚集體中檢出。 | 含實驗來源 | 證據與來源Cytoplasmic vesicle, autophagosome; Preautophagosomal structure; Cytoplasm, cytosol; Nucleus, PML body; Late endosome; Lysosome; Nucleus; Endoplasmic reticulum; Cytoplasm, myofibril, sarcomere; In cardiac muscle, localizes to the sarcomeric band (By similarity). Localizes to cytoplasmic membraneless inclusion bodies, known as p62 bodies, containing polyubiquitinated protein aggregates. In neurodegenerative diseases, detected in Lewy bodies in Parkinson disease, neurofibrillary tangles in Alzheimer disease, and HTT aggregates in Huntington disease. In protein aggregate diseases of the liver, found in large amounts in Mallory bodies of alcoholic and nonalcoholic steatohepatitis, hyaline bodies in hepatocellular carcinoma, and in SERPINA1 aggregates. Enriched in Rosenthal fibers of pilocytic astrocytoma. In the cytoplasm, observed in both membrane-free ubiquitin-containing protein aggregates (sequestosomes) and membrane-surrounded autophagosomes. Colocalizes with TRIM13 in the perinuclear endoplasmic reticulum. Co-localizes with TRIM5 in cytoplasmic bodies. When nuclear export is blocked by treatment with leptomycin B, accumulates in PML bodies PMID 15953362 ↗ · PMID 16286508 ↗ · PMID 17580304 ↗ · PMID 20168092 ↗ · PMID 37802024 ↗ · PMID 34471133 ↗ · PMID 11786419 ↗ · PMID 11981755 ↗ · PMID 20357094 ↗ · PMID 21923101 ↗ · PMID 22017874 ↗ · PMID 22792322 ↗ · PMID 29343546 ↗ · PMID 29507397 ↗ · PMID 31857589 ↗ · PMID 37306101 ↗ · PMID 12471037 ↗ · PMID 9566925 ↗ · PMID 10708586 ↗ · PMID 22178386 ↗ |
| 調控 | NFE2L2/NRF2 會直接活化 SQSTM1 的表現,形成正向回饋。來源另記載,蛋白質層級的 SQSTM1 受蛋白酶體抑制劑 PSI 與 prostaglandin J2(PGJ2)影響,並有 phorbol 12-myristate 13-acetate(PMA)相關調控紀錄。 | 含實驗來源 | 證據與來源By proteasomal inhibitor PSI and prostaglandin J2 (PGJ2) (at protein level). By phorbol 12-myristate 13-acetate (PMA). Expression is directly activated by NFE2L2/NRF2; creating a positive feedback loop PMID 12700667 ↗ · PMID 15911346 ↗ · PMID 20452972 ↗ · PMID 9762895 ↗ |
| 疾病關聯 | Paget disease of bone 3 是骨骼重塑疾病,特徵為骨轉換增加,可影響全身一處或多處骨骼,主要涉及中軸骨骼。破骨細胞過度活化後伴隨代償性成骨活動,形成結構紊亂的編織骨,使骨骼較正常成人板層骨脆弱、體積較大、密度較低、血管較多且易骨折。此病被列為由影響 SQSTM1 的變異所致。 | 含實驗來源 | 證據與來源Paget disease of bone 3 PDB3 A disorder of bone remodeling characterized by increased bone turnover affecting one or more sites throughout the skeleton, primarily the axial skeleton. Osteoclastic overactivity followed by compensatory osteoblastic activity leads to a structurally disorganized mosaic of bone (woven bone), which is mechanically weaker, larger, less compact, more vascular, and more susceptible to fracture than normal adult lamellar bone. The disease is caused by variants affecting the gene represented in this entry MIM: 167250 PMID 11992264 ↗ · PMID 12374763 ↗ · PMID 14584883 ↗ · PMID 15125799 ↗ · PMID 15146436 ↗ · PMID 15176995 ↗ · PMID 15207768 ↗ · PMID 19931284 ↗ · PMID 29507397 ↗ |
| 疾病關聯 | 在亨丁頓病細胞模型中,sequestosome 1 似乎形成外殼包圍突變 HTT 聚集體。這種包覆可能保護細胞免於凋亡,可能的方式是將自噬體成分招募至多泛素化蛋白質聚集體;來源以可能性描述此作用。 | 含實驗來源 | 證據與來源In a cell model for Huntington disease (HD), appears to form a shell surrounding aggregates of mutant HTT that may protect cells from apoptosis, possibly by recruiting autophagosomal components to the polyubiquitinated protein aggregates PMID 16286508 ↗ |
| 疾病關聯 | frontotemporal dementia and/or amyotrophic lateral sclerosis 3 是神經退化疾病,患者可有額顳葉失智症和/或肌萎縮性側索硬化症,家族內表現差異大;部分患者也可能發生 Paget disease of bone。前者涉及額葉與顳葉萎縮、神經元流失及社會、行為或語言功能逐漸改變;後者涉及腦、腦幹與脊髓運動神經元死亡,並可導致致命性癱瘓。此病被列為由影響 SQSTM1 的變異所致。 | 含實驗來源 | 證據與來源Frontotemporal dementia and/or amyotrophic lateral sclerosis 3 FTDALS3 A neurodegenerative disorder characterized by frontotemporal dementia and/or amyotrophic lateral sclerosis in affected individuals. There is high intrafamilial variation. Frontotemporal dementia is characterized by frontal and temporal lobe atrophy associated with neuronal loss, gliosis, and dementia. Patients exhibit progressive changes in social, behavioral, and/or language function. Amyotrophic lateral sclerosis is characterized by the death of motor neurons in the brain, brainstem, and spinal cord, resulting in fatal paralysis. Some FTDALS3 patients may also develop Paget disease of bone. The disease is caused by variants affecting the gene represented in this entry MIM: 616437 PMID 22084127 ↗ · PMID 24042580 ↗ · PMID 24899140 ↗ · PMID 25114083 ↗ |
| 疾病關聯 | 兒童發病、伴有共濟失調、肌張力不全及凝視麻痺的神經退化疾病,起病於兒童期或青少年期,表現包括步態異常、共濟失調、構音障礙、肌張力不全、垂直凝視麻痺與認知衰退。其遺傳模式符合常染色體隱性遺傳;來源將此病列為由影響 SQSTM1 的變異所致。 | 含實驗來源 | 證據與來源Neurodegeneration with ataxia, dystonia, and gaze palsy, childhood-onset NADGP A neurodegenerative disorder characterized by gait abnormalities, ataxia, dysarthria, dystonia, vertical gaze palsy, and cognitive decline. Disease onset is in childhood or adolescence. NADGP transmission pattern is consistent with autosomal recessive inheritance. The disease is caused by variants affecting the gene represented in this entry MIM: 617145 PMID 27545679 ↗ |
| 疾病關聯 | 伴有鑲邊空泡的遠端肌病為常染色體顯性遺傳疾病,成年後發病。患者可有上下肢遠端肌力減弱、行走困難及肩帶近端肌力減弱;肌肉切片可見鑲邊空泡。來源將此病列為由影響 SQSTM1 的變異所致。 | 含實驗來源 | 證據與來源Myopathy, distal, with rimmed vacuoles DMRV An autosomal dominant myopathy with adult onset, characterized by muscle weakness of the distal upper and lower limbs, walking difficulties, and proximal weakness of the shoulder girdle muscles. Muscle biopsy shows rimmed vacuoles. The disease is caused by variants affecting the gene represented in this entry MIM: 617158 PMID 26208961 ↗ |
| 疾病關聯 | 一種急性淋巴性白血病中可見涉及 SQSTM1 的染色體異常,具體為與 NUP214 相關的 t(5;9)(q35;q34) 易位。 | 含實驗來源 | 證據與來源A chromosomal aberration involving SQSTM1 is found in a form of acute lymphoblastic leukemia. Translocation t(5;9)(q35;q34) with NUP214 PMID 20851865 ↗ |
核酸與蛋白質序列
ACGGCCCGTTTTCCGCCAGCTCGCCGCTCGCTATGGCGTC40GCTCACCGTGAAGGCCTACCTTCTGGGCAAGGAGGACGCG80GCGCGCGAGATTCGCCGCTTCAGCTTCTGCTGCAGCCCCG120AGCCTGAGGCGGAAGCCGAGGCTGCGGCGGGTCCGGGACC160CTGCGAGCGGCTGCTGAGCCGGGTGGCCGCCCTGTTCCCC200GCGCTGCGGCCTGGCGGCTTCCAGGCGCACTACCGCGATG240AGGACGGGGACTTGGTTGCCTTTTCCAGTGACGAGGAATT280GACAATGGCCATGTCCTACGTGAAGGATGACATCTTCCGA320ATCTACATTAAAGAGAAAAAAGAGTGCCGGCGGGACCACC360GCCCACCGTGTGCTCAGGAGGCGCCCCGCAACATGGTGCA400CCCCAATGTGATCTGCGATGGCTGCAATGGGCCTGTGGTA440GGAACCCGCTACAAGTGCAGCGTCTGCCCAGACTACGACT480TGTGTAGCGTCTGCGAGGGAAAGGGCTTGCACCGGGGGCA520CACCAAGCTCGCATTCCCCAGCCCCTTCGGGCACCTGTCT560GAGGGCTTCTCGCACAGCCGCTGGCTCCGGAAGGTGAAAC600ACGGACACTTCGGGTGGCCAGGATGGGAAATGGGTCCACC640AGGAAACTGGAGCCCACGTCCTCCTCGTGCAGGGGAGGCC680CGCCCTGGCCCCACGGCAGAATCAGCTTCTGGTCCATCGG720AGGATCCGAGTGTGAATTTCCTGAAGAACGTTGGGGAGAG760TGTGGCAGCTGCCCTTAGCCCTCTGGGCATTGAAGTTGAT800ATCGATGTGGAGCACGGAGGGAAAAGAAGCCGCCTGACCC840CCGTCTCTCCAGAGAGTTCCAGCACAGAGGAGAAGAGCAG880CTCACAGCCAAGCAGCTGCTGCTCTGACCCCAGCAAGCCG920GGTGGGAATGTTGAGGGCGCCACGCAGTCTCTGGCGGAGC960cDNA 使用 DNA 字母 T;mRNA 模式改以 U 顯示。轉錄本保留已註解的非編碼區,未另外加入 poly(A) 尾;非編碼 RNA 的參考轉錄本也可能仍需後續加工。數字為所選序列的 1-based 位置。長序列以黃色捲軸瀏覽,可複製或下載完整轉錄本與蛋白質;基因組 DNA 隨捲動取得所需範圍。