基因總覽
SMPD1(sphingomyelin phosphodiesterase 1)是蛋白質編碼基因,產物為 Acid sphingomyelinase,屬於 acid sphingomyelinase family。此蛋白質有兩種酵素形式,源自同一蛋白質前驅物的不同運輸途徑:一種送往內溶小體區室,另一種釋放至細胞外;在某些壓力反應中,溶酶體胞吐也可能是分泌形式的重要來源。蛋白質序列長 631 個胺基酸,含有 Saposin B-type 結構域。
基因異名與舊稱
異名取自 HGNC,可能包含歷史名稱;蛋白質名稱以 UniProt 註解為準。
染色體位置與基因結構
查看實際轉錄本與 exon 註解
| Transcript | Genomic coordinates | Exons |
|---|---|---|
| ENST00000342245 ★ | 6,390,474–6,394,996 | 6 |
| ENST00000527275 | 6,390,381–6,394,997 | 6 |
| ENST00000880909 | 6,390,381–6,394,997 | 6 |
| ENST00000880910 | 6,390,381–6,394,997 | 6 |
| ENST00000880911 | 6,390,381–6,394,997 | 5 |
| ENST00000989867 | 6,390,381–6,394,998 | 6 |
| ENST00000989869 | 6,390,381–6,394,997 | 5 |
| ENST00001120251 | 6,390,381–6,394,997 | 6 |
| ENST00001120252 | 6,390,381–6,394,996 | 5 |
| ENST00001136050 | 6,390,381–6,394,997 | 6 |
| ENST00000530395 | 6,390,446–6,392,042 | 2 |
| ENST00000526280 | 6,391,877–6,394,998 | 4 |
顯示 12/12 個蛋白質編碼轉錄本;canonical 優先。
帶型與著絲點依 Ensembl 座標繪製;核染色體長度以 GRCh38 第 1 號染色體為共同尺度。黃色標記表示本基因位置,細小區間加粗以利辨識;實際基因長度與 exon 見下方資料。
分子功能與生物學過程
SMPD1 的主要酵素功能是水解 sphingomyelin,產生 ceramide 與 phosphocholine。其溶酶體形式參與 sphingomyelin 分解;來源亦指出此蛋白質有助於膽固醇自內溶小體膜輸出,並具有作用於 1,2-diacylglycerolphosphocholine 與 1,2-diacylglycerolphosphoglycerol 的 phospholipase C 活性。生成 ceramide 也與壓力誘發的細胞凋亡調節有關。
分泌至細胞外的形式可在質膜外層產生 ceramide,藉此改變質膜排列與細胞訊號。壓力、發炎介質 IL1B、IFNG 或 TNF,以及細菌或病毒感染,都與分泌形式增加有關。ceramide 可使膜筏重組成較大的訊號平台;在感染細胞中,這些平台與 P. aeruginosa 內化、細胞凋亡及細胞激素反應調節相關。部分細菌感染會活化分泌,增加質膜外層 ceramide,並有利於感染進程。
細胞受傷時,溶酶體形式可在 Ca(2+) 存在下釋放至細胞外,促進胞吞作用與質膜修復。細菌感染時,CASP7 可在細胞外切割產生加工形式;依相似性推論,此形式轉換 sphingomyelin 為 ceramide 的能力較高,並可促進質膜修復。此修復作用被認為可抵銷感染期間形成的 gasdermin-D(GSDMD)與 perforin(PRF1)孔洞。
Promoter 與基因調控
>SMPD1 ENST00000342245 GRCh38 chr11:6389474-6390574 strand=1 5′→3′ 相對 TSS:-1000 到 +100 bp;1101 bp 依轉錄本 TSS 擷取的基因組序列;TSS = 0,兩端包含,未驗證為 promoter GAATTCTGCTGAGGGAGAAGGAATGGATCAGGGAACAGATTAACTAGCACATTATCATGTGAAGGGGTCT GTTCAGGTGTGATTATATTCTTGGTTTTGTAGGGAGGGGAAGAAAAAAACCGTTGTTCCTTTTGATGGGT CTGGACGCTAGGTAACGGCTTTGGGAGAGAGGGCGCGGGAGTAGGAAGGCCAGACACACCTTAAGGCTTA ACTTAGTAAGTCAAACCACCATATTTTGGGTATGGATTTCTGAGCCCCAATATAATAGGTACTTCTTAGG GTTGTTGTGAGAATTGAAGATTATTAATTATAAAGTGCCTGGGTTGGTGCTTGGCACATCATAAACAACT CCATAAATGCTCGCTTTTACTGTCGTGGATACACGGAGGTGGGAGACCCAATTGGGTTCCCGCCCATGTT ATTGGCCCCCACGGCTATATGGTCTTTACGGCTTCCTAGTCTCTTCACCATCTCTAAGGTTTGTTTCCTC ATCTGAATCACAGGTGAGTGATTCTCAGGGTGACTCAAGAGGGCTGGTGCCAGTGGCAGAGCATGGGGAA TCGAGGGAAGGCGCCTTCCTGTCAGAGGCAACACACCCAGTGGGAGGATCCTGCCCGCCCTGCTCTCTCC TACCTCCCCTTCCCGGGCTAAACGCTGGGGTCGGTCTGGCAGCTATTCCGGGAATCTGAGCGCGGATTCT GACAAAGGAGACGTCTTCCACCGACCACATCACATGGAGCTCCAAAGCACGAGCACGGCCTCCCGCGGCT GTGACCTCAAGGCGGAGCCCCTGGTGACCTCAGGGAGAGTCCCCACCCCCGCAGCCCGTGCGCCCGGGGC AGGGCGGGGGCAGGGAGAGGGGGCGGAATCGGGGCGGTCCCGGGAGCGCCCCGCCCCCTCCGCCTCCGCA GCGTTGACAGCCGCCCGCCACCGAGAGATCAGCTGTCAGAGATCAGAGGAAGAGGAAGGGGCGGAGCTGC TTTGCGGCCGGCCGCGGAGCAGTCAGCCGACTACAGAGAAGGGTAATCGGGTGTCCCCGGCGCCGCCCGG GGCCCTGAGGGCTGGCTAGGGTCCAGGCCGGGGGGGACGGGACAGACGAAC
EPDnew 實驗支持 promoter/TSS · 1 筆
| EPDnew ID | TSS(1-based) | 股向 | 來源顯示區間 |
|---|---|---|---|
| SMPD1_1 ↗ | 11:6,390,474 | 正股 | 6,390,425–6,390,484 |
EPDnew human v006 · UCSC hg38,GRCh38/hg38,透過 UCSC 取得。TSS 具有 CAGE/RAMPAGE 等實驗資料支持;任意擷取的上下游區間仍需另行判讀調控功能,不能視為整段皆經功能驗證。
EPD 封存狀態 ↗ · UCSC 資料說明 ↗ · EPD team, SIB Swiss Institute of Bioinformatics; UCSC Genome Browser · CC BY 4.0
查看已取得的調控/motif 註解
ENSR11_873WP · enhancer · 6387857–6388038 · regulatory
ENSR11_B398G · enhancer · 6389402–6390232 · regulatory
ENSR11_873Z5 · promoter · 6390233–6390485 · regulatory
ENSR11_53HKPH · CTCF_binding_site · 6390244–6390265 · regulatory
· motif · 6388073–6388082 · motif
· motif · 6389547–6389559 · motif
· motif · 6389879–6389890 · motif
· motif · 6389910–6389927 · motif
· motif · 6390246–6390262 · motif
· motif · 6390264–6390276 · motif
· motif · 6390283–6390293 · motif
· motif · 6390285–6390298 · motif
· motif · 6390314–6390327 · motif
· motif · 6390327–6390340 · motif
· motif · 6390361–6390371 · motif
· motif · 6390363–6390376 · motif
· motif · 6390372–6390385 · motif
· motif · 6390440–6390450 · motif
蛋白質結構域與序列
參考蛋白質長度:631 aa
SMPD1 產物長 631 個胺基酸,屬於 acid sphingomyelinase family。其序列註解包含位於第 1–46 個胺基酸的訊號序列、第 87–171 個胺基酸的 Saposin B-type 結構域,以及第 1–23 個胺基酸的無序區。
蛋白質三維結構
細胞內定位
SMPD1 可位於溶酶體及脂滴,也可分泌至細胞外。 分泌形式會隨 IL1B、IFNG、TNF、壓力或感染而增加;這種增加似乎與溶酶體形式的 Ca(2+) 依賴性胞吐有關,且分泌依賴 Ser-510 磷酸化。 另有一種由 CASP7 切割形成的加工型,位於細胞外。
深綠色圓點:來源記載的蛋白質定位;數量不表示含量。
細胞外定位:圓點散佈於細胞周圍,與細胞膜保持距離。
未繪示構造:Lipid droplet。這些構造未在通用細胞圖中標點,仍保留來源定位名稱。
動物細胞結構示意;器官大小與數量不按比例。點選細胞構造可查看定位註解。
交互作用與訊號網絡
拖曳節點後放開可帶動位置變化;點選夥伴查看證據。位置與連線長度不代表結合強度,圖中未推定夥伴彼此之間的關係。
更多交互作用夥伴 · 已取得 1 個夥伴
- CASP7P55210 · UniProt INTERACTION · 6 experiments
SMPD1 以單體形式存在,並與 SORT1 互作;此互作是 SMPD1 定位至溶酶體所必需。來源未指出 SMPD1 與 SORT1 組成特定複合體。
疾病與遺傳關聯
SMPD1 的基因變異與 Niemann-Pick disease A 及 Niemann-Pick disease B 有關。兩者均因 sphingomyelin 無法正常水解為 ceramide 而造成脂質累積。A 型通常在出生後第一年發病,以神經退化及神經內臟症狀為主;B 型較晚發病,臨床表徵主要涉及內臟,通常沒有神經症狀。兩型之間存在連續的表型差異,也有兼具兩型特徵的中間型。
Contextual Functional Evidence Matrix
矩陣以「功能主張」為列,以細胞情境、干預條件、量測結果與證據來源為欄,方便比較同一功能在不同條件下的支持情形。只有含情境與實驗資訊的紀錄會列入矩陣;一般功能註解另列於下方。
功能註解總覽 · 17 筆
| 功能面向 | 功能敘述 | 證據類型 | 可查核來源 |
|---|---|---|---|
| 功能 | SMPD1 將 sphingomyelin 轉換為 ceramide,並可由同一蛋白質前驅物經不同運輸途徑形成兩種酵素形式:一種送至內溶小體區室,另一種釋放至細胞外。各種壓力下,溶酶體胞吐可能是分泌形式的重要來源。 | 含實驗來源 | 證據與來源Converts sphingomyelin to ceramide. Exists as two enzymatic forms that arise from alternative trafficking of a single protein precursor, one that is targeted to the endolysosomal compartment, whereas the other is released extracellularly. However, in response to various forms of stress, lysosomal exocytosis may represent a major source of the secretory form PMID 12563314 ↗ · PMID 1840600 ↗ · PMID 18815062 ↗ · PMID 20530211 ↗ · PMID 20807762 ↗ · PMID 21098024 ↗ · PMID 22573858 ↗ · PMID 25339683 ↗ · PMID 25920558 ↗ · PMID 27659707 ↗ · PMID 33163980 ↗ · PMID 9393854 ↗ · PMID 9660788 ↗ |
| 功能 | 在溶酶體中,SMPD1 將 sphingomyelin 轉換為 ceramide,並參與膽固醇自內溶小體膜輸出。它也具有作用於 1,2-diacylglycerolphosphocholine 與 1,2-diacylglycerolphosphoglycerol 的 phospholipase C 活性,並可透過產生 ceramide 調節壓力誘發的細胞凋亡。 | 含實驗來源 | 證據與來源In the lysosomes, converts sphingomyelin to ceramide. Plays an important role in the export of cholesterol from the intraendolysosomal membranes. Also has phospholipase C activities toward 1,2-diacylglycerolphosphocholine and 1,2-diacylglycerolphosphoglycerol. Modulates stress-induced apoptosis through the production of ceramide PMID 20807762 ↗ · PMID 21098024 ↗ · PMID 25339683 ↗ · PMID 8706124 ↗ |
| 功能 | 分泌型 SMPD1 透過將 sphingomyelin 轉為 ceramide 重組質膜並調節細胞訊號;壓力、IL1B、IFNG、TNF,以及細菌或病毒感染皆與其分泌增加有關。質膜外層 ceramide 可促使膜筏形成較大訊號平台,與 P. aeruginosa 內化、感染細胞凋亡及細胞激素反應調節相關。細胞受傷時,Ca(2+) 可促使溶酶體形式釋放,進而促進胞吞與質膜修復。 | 含實驗來源 | 證據與來源When secreted, modulates cell signaling with its ability to reorganize the plasma membrane by converting sphingomyelin to ceramide. Secreted form is increased in response to stress and inflammatory mediators such as IL1B, IFNG or TNF as well as upon infection with bacteria and viruses. Produces the release of ceramide in the outer leaflet of the plasma membrane playing a central role in host defense. Ceramide reorganizes these rafts into larger signaling platforms that are required to internalize P.aeruginosa, induce apoptosis and regulate the cytokine response in infected cells. In wounded cells, the lysosomal form is released extracellularly in the presence of Ca(2+) and promotes endocytosis and plasma membrane repair PMID 12563314 ↗ · PMID 17303575 ↗ · PMID 20530211 ↗ · PMID 20807762 ↗ · PMID 9393854 ↗ |
| 功能 | 細菌感染時,CASP7 可在細胞外切割產生此加工形式。依相似性推論,該形式轉換 sphingomyelin 為 ceramide 的能力較高,並可促進質膜修復;此修復作用可抵銷感染期間形成的 gasdermin-D(GSDMD)與 perforin(PRF1)孔洞。 | 含實驗來源 | 證據與來源This form is generated following cleavage by CASP7 in the extracellular milieu in response to bacterial infection. It shows increased ability to convert sphingomyelin to ceramide and promotes plasma membrane repair (By similarity). Plasma membrane repair by ceramide counteracts the action of gasdermin-D (GSDMD) perforin (PRF1) pores that are formed in response to bacterial infection (By similarity) PMID 21157428 ↗ |
| 功能 | 細菌感染可活化 SMPD1 分泌,包括 P. aeruginosa、N. gonorrhoeae 等細菌;分泌活化會使質膜外層釋出 ceramide,並促進感染。 | 含實驗來源 | 證據與來源(Microbial infection) Secretion is activated by bacteria such as P.aeruginosa, N.gonorrhoeae and others, this activation results in the release of ceramide in the outer leaflet of the plasma membrane which facilitates the infection PMID 12563314 ↗ · PMID 9393854 ↗ · PMID 31155842 ↗ |
| 功能 | 人類冠狀病毒 SARS-CoV、SARS-CoV-2 及 Zaire ebolavirus 可活化 SMPD1 分泌;此反應使 ceramide 釋放至質膜外層,並促進感染。 | 含實驗來源 | 證據與來源(Microbial infection) Secretion is activated by human coronaviruses SARS-CoV and SARS-CoV-2 as well as Zaire ebolavirus, this activation results in the release of ceramide in the outer leaflet of the plasma membrane which facilitates the infection PMID 22573858 ↗ · PMID 33163980 ↗ |
| 功能 | 此來源指出,該形式缺少結合 Zn(2+) 輔因子的胺基酸殘基,因此沒有酵素活性。 | 含實驗來源 | |
| 分子活性 | a sphingomyelin + H2O = phosphocholine + an N-acylsphing-4-enine + H(+) | 含實驗來源 | 證據與來源a sphingomyelin + H2O = phosphocholine + an N-acylsphing-4-enine + H(+) PMID 12563314 ↗ · PMID 15877209 ↗ · PMID 1718266 ↗ · PMID 1840600 ↗ · PMID 18815062 ↗ · PMID 22573858 ↗ · PMID 25339683 ↗ · PMID 26084044 ↗ · PMID 27349982 ↗ · PMID 33163980 ↗ · PMID 8702487 ↗ · PMID 8706124 ↗ |
| 分子活性 | N-(octadecanoyl)-sphing-4-enine-1-phosphocholine + H2O = N-octadecanoylsphing-4-enine + phosphocholine + H(+) | 含實驗來源 | 證據與來源N-(octadecanoyl)-sphing-4-enine-1-phosphocholine + H2O = N-octadecanoylsphing-4-enine + phosphocholine + H(+) PMID 25339683 ↗ |
| 分子活性 | 1,2-dihexadecanoyl-sn-glycero-3-phosphocholine + H2O = 1,2-dihexadecanoyl-sn-glycerol + phosphocholine + H(+) | 含實驗來源 | 證據與來源1,2-dihexadecanoyl-sn-glycero-3-phosphocholine + H2O = 1,2-dihexadecanoyl-sn-glycerol + phosphocholine + H(+) PMID 25339683 ↗ |
| 分子活性 | a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = phosphocholine + a 1,2-diacyl-sn-glycerol + H(+) | 含實驗來源 | 證據與來源a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = phosphocholine + a 1,2-diacyl-sn-glycerol + H(+) PMID 25339683 ↗ |
| 分子活性 | 每個次單元可結合 2 個 Zn(2+) 離子。 | 資料庫紀錄 | |
| 交互作用 | SMPD1 以單體形式存在,並與 SORT1 互作;此互作是 SMPD1 定位至溶酶體所必需。 | 含實驗來源 | 證據與來源Monomer. Interacts with SORT1; the interaction is required for SMPD1 targeting to lysosomes PMID 16787399 ↗ · PMID 27349982 ↗ |
| 細胞定位 | SMPD1 位於溶酶體與脂滴,也可分泌至細胞外。IL1B、TNF、壓力及病毒感染可促使分泌形式增加;此增加似乎源自溶酶體形式的胞吐,且依賴 Ca(2+)。分泌亦依賴 Ser-510 磷酸化,並可受 IL1B、IFNG、TNF 及細菌或病毒感染誘導。 | 含實驗來源 | 證據與來源Lysosome; Lipid droplet; Secreted; The secreted form is induced in a time- and dose-dependent by IL1B and TNF as well as stress and viral infection. This increase of the secreted form seems to be due to exocytosis of the lysosomal form and is Ca(2+)-dependent. Secretion is dependent of phosphorylation at Ser-510. Secretion is induced by inflammatory mediators such as IL1B, IFNG or TNF as well as infection with bacteria and viruses PMID 16787399 ↗ · PMID 18815062 ↗ · PMID 20530211 ↗ · PMID 20807762 ↗ · PMID 27659707 ↗ · PMID 9660788 ↗ · PMID 25339683 ↗ · PMID 12563314 ↗ · PMID 17303575 ↗ · PMID 22573858 ↗ · PMID 8702487 ↗ · PMID 9030779 ↗ |
| 細胞定位 | Sphingomyelin phosphodiesterase 的加工形式位於細胞外並由 CASP7 切割形成。 | 推論支持 | 證據與來源Sphingomyelin phosphodiesterase, processed form; Secreted, extracellular space; This form is generated following cleavage by CASP7 |
| 疾病關聯 | Niemann-Pick disease A 是早發型溶酶體儲積疾病,與 sphingomyelin 無法水解為 ceramide 有關,造成多種細胞脂質累積並導致細胞死亡。通常在出生後第一年發病,以神經退化為主,可伴隨智能障礙、消化問題、生長不良、肝脾腫大及嚴重神經症狀;臨床表現有差異,且與 B 型之間存在連續的表型範圍。影響 SMPD1 的變異可致病。 | 含實驗來源 | 證據與來源Niemann-Pick disease A NPDA An early-onset lysosomal storage disorder caused by failure to hydrolyze sphingomyelin to ceramide. It results in the accumulation of sphingomyelin and other metabolically related lipids in reticuloendothelial and other cell types throughout the body, leading to cell death. Niemann-Pick disease type A is a primarily neurodegenerative disorder characterized by onset within the first year of life, intellectual disability, digestive disorders, failure to thrive, major hepatosplenomegaly, and severe neurologic symptoms. The severe neurological disorders and pulmonary infections lead to an early death, often around the age of four. Clinical features are variable. A phenotypic continuum exists between type A (basic neurovisceral) and type B (purely visceral) forms of Niemann-Pick disease, and the intermediate types encompass a cluster of variants combining clinical features of both types A and B. The disease is caused by variants affecting the gene represented in this entry MIM: 257200 PMID 12556236 ↗ · PMID 1391960 ↗ · PMID 15221801 ↗ · PMID 15877209 ↗ · PMID 1618760 ↗ · PMID 1718266 ↗ · PMID 18815062 ↗ · PMID 19405096 ↗ · PMID 2023926 ↗ · PMID 20386867 ↗ · PMID 22818240 ↗ · PMID 23252888 ↗ · PMID 23430884 ↗ · PMID 26499107 ↗ · PMID 27338287 ↗ · PMID 8680412 ↗ · PMID 8693491 ↗ · PMID 9266408 ↗ · PMID 9660788 ↗ |
| 疾病關聯 | Niemann-Pick disease B 是較晚發病的溶酶體儲積疾病,與 sphingomyelin 無法水解為 ceramide 有關,造成多種脂質累積並導致細胞死亡。表現主要限於內臟,常見肝脾腫大,也可能有肺部症狀,患者通常沒有神經症狀;發病可在幼年,部分患者可存活至成年。此型與 A 型存在連續的表型範圍,影響 SMPD1 的變異可致病。 | 含實驗來源 | 證據與來源Niemann-Pick disease B NPDB A late-onset lysosomal storage disorder caused by failure to hydrolyze sphingomyelin to ceramide. It results in the accumulation of sphingomyelin and other metabolically related lipids in reticuloendothelial and other cell types throughout the body, leading to cell death. Clinical signs involve only visceral organs. The most constant sign is hepatosplenomegaly which can be associated with pulmonary symptoms. Patients remain free of neurologic manifestations. However, a phenotypic continuum exists between type A (basic neurovisceral) and type B (purely visceral) forms of Niemann-Pick disease, and the intermediate types encompass a cluster of variants combining clinical features of both types A and B. In Niemann-Pick disease type B, onset of the first symptoms occurs in early childhood and patients can survive into adulthood. The disease is caused by variants affecting the gene represented in this entry MIM: 607616 PMID 12369017 ↗ · PMID 12556236 ↗ · PMID 1301192 ↗ · PMID 15241805 ↗ · PMID 16010684 ↗ · PMID 1618760 ↗ · PMID 16472269 ↗ · PMID 18815062 ↗ · PMID 1885770 ↗ · PMID 19050888 ↗ · PMID 19405096 ↗ · PMID 20386867 ↗ · PMID 21098024 ↗ · PMID 21621718 ↗ · PMID 22613662 ↗ · PMID 22818240 ↗ · PMID 23252888 ↗ · PMID 23430512 ↗ · PMID 25920558 ↗ · PMID 26084044 ↗ · PMID 26499107 ↗ · PMID 27338287 ↗ · PMID 27659707 ↗ · PMID 8051942 ↗ · PMID 8664904 ↗ |
核酸與蛋白質序列
AGTCAGCCGACTACAGAGAAGGGTAATCGGGTGTCCCCGG40CGCCGCCCGGGGCCCTGAGGGCTGGCTAGGGTCCAGGCCG80GGGGGGACGGGACAGACGAACCAGCCCCGTGTAGGAAGCG120CGACAATGCCCCGCTACGGAGCGTCACTCCGCCAGAGCTG160CCCCAGGTCCGGCCGGGAGCAGGGACAAGACGGGACCGCC200GGAGCCCCCGGACTCCTTTGGATGGGCCTGGTGCTGGCGC240TGGCGCTGGCGCTGGCGCTGGCGCTGGCTCTGTCTGACTC280TCGGGTTCTCTGGGCTCCGGCAGAGGCTCACCCTCTTTCT320CCCCAAGGCCATCCTGCCAGGTTACATCGCATAGTGCCCC360GGCTCCGAGATGTCTTTGGGTGGGGGAACCTCACCTGCCC400AATCTGCAAAGGTCTATTCACCGCCATCAACCTCGGGCTG440AAGAAGGAACCCAATGTGGCTCGCGTGGGCTCCGTGGCCA480TCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGT520GTGCCAATCCATTGTCCACCTCTTTGAGGATGACATGGTG560GAGGTGTGGAGACGCTCAGTGCTGAGCCCATCTGAGGCCT600GTGGCCTGCTCCTGGGCTCCACCTGTGGGCACTGGGACAT640TTTCTCATCTTGGAACATCTCTTTGCCTACTGTGCCGAAG680CCGCCCCCCAAACCCCCTAGCCCCCCAGCCCCAGGTGCCC720CTGTCAGCCGCATCCTCTTCCTCACTGACCTGCACTGGGA760TCATGACTACCTGGAGGGCACGGACCCTGACTGTGCAGAC800CCACTGTGCTGCCGCCGGGGTTCTGGCCTGCCGCCCGCAT840CCCGGCCAGGTGCCGGATACTGGGGCGAATACAGCAAGTG880TGACCTGCCCCTGAGGACCCTGGAGAGCCTGTTGAGTGGG920CTGGGCCCAGCCGGCCCTTTTGATATGGTGTACTGGACAG960cDNA 使用 DNA 字母 T;mRNA 模式改以 U 顯示。轉錄本保留已註解的非編碼區,未另外加入 poly(A) 尾;非編碼 RNA 的參考轉錄本也可能仍需後續加工。數字為所選序列的 1-based 位置。長序列以黃色捲軸瀏覽,可複製或下載完整轉錄本與蛋白質;基因組 DNA 隨捲動取得所需範圍。