基因總覽
SLC22A8(solute carrier family 22 member 8)是蛋白質編碼基因,產物屬於 major facilitator 超家族中的有機陽離子轉運蛋白家族。其蛋白質為多次跨膜膜蛋白,具有多段跨膜螺旋及分布於膜兩側的區域,適合執行跨膜運輸。SLC22A8 的基本角色是運送多種有機陰離子,與腎臟及腦部的物質移動相關;其底物範圍包括內源性有機陰離子與外來化合物。
基因異名與舊稱
異名取自 HGNC,可能包含歷史名稱;蛋白質名稱以 UniProt 註解為準。
染色體位置與基因結構
查看實際轉錄本與 exon 註解
| Transcript | Genomic coordinates | Exons |
|---|---|---|
| ENST00000336232 ★ | 62,992,824–63,015,841 | 11 |
| ENST00000545207 | 62,992,824–63,015,848 | 11 |
| ENST00000535878 | 62,992,824–63,015,810 | 10 |
| ENST00000886052 | 62,992,824–63,015,848 | 10 |
| ENST00000946794 | 62,992,824–63,017,561 | 11 |
| ENST00001141906 | 62,992,824–63,015,848 | 11 |
| ENST00000311438 | 62,993,237–63,014,958 | 9 |
| ENST00000430500 | 62,993,237–63,015,839 | 11 |
顯示 8/8 個蛋白質編碼轉錄本;canonical 優先。
帶型與著絲點依 Ensembl 座標繪製;核染色體長度以 GRCh38 第 1 號染色體為共同尺度。黃色標記表示本基因位置,細小區間加粗以利辨識;實際基因長度與 exon 見下方資料。
分子功能與生物學過程
SLC22A8 是有機陰離子/二羧酸交換蛋白,藉由交換兩類物質,間接利用鈉離子梯度所建立的驅動力促進有機陰離子攝取。常見交換底物包括雌酮 3-硫酸(E1S)或尿酸,以及 glutarate、2-oxoglutarate 等二羧酸;不同底物可呈現不同交換方向。E1S 運輸受 pH 與氯離子影響,也可能涉及 E1S/cGMP 交換。
在腎小管基底外側,SLC22A8 參與 prostaglandin E2(PGE2)及 prostaglandin F2α(PGF2α)的運輸,也可運送 kynurenate、xanthurenate 等具有神經活性的 tryptophan 代謝物。它亦參與 biopterin 的運輸,包括 tetrahydrobiopterin(BH4)、dihydrobiopterin(BH2)與 sepiapterin 的攝取及分泌至尿液;這項運輸與血液 biopterin 的基礎濃度有關。steviol 的基底外側運輸則僅被描述為可能參與。
SLC22A8 參與腎臟對多種物質的處理。一方面,它有助於腎臟攝取 indoxyl sulfate、indole acetate、hippurate、CMPF 等尿毒素,也涉及 pravastatin、benzylpenicillin(PCG)、E1S 與 dehydroepiandrosterone sulfate(DHEAS)的攝取;對 temocaprilat 的攝取則僅有部分參與。另一方面,它可能透過與二羧酸交換,促進藥物及外來物質的運輸與腎臟排泄。相關底物包括 fexofenadine、cimetidine、2,4-D、p-aminohippurate(PAH)、acyclovir 與 ochratoxin;這些作用支持其參與外來化合物的處理,但不能據此推定每種底物在所有情境下的運輸程度相同。
在脈絡叢,SLC22A8 被認為參與一種解毒系統,可將 E1S、taurocholate、PCG、2,4-D 與 PAH 等物質由腦脊髓液移往血液,之後可由尿液或膽汁排出。它也可經血腦障壁協助 PAH、PCG,以及 pravastatin、pitavastatin 從大腦移入血液循環。另有資料指出它可能參與腎上腺 cortisol 釋放。整體而言,SLC22A8 在腎臟與腦部的運輸作用,與內源性陰離子及藥物、外來物質的清除相關。
Promoter 與基因調控
>SLC22A8 ENST00000336232 GRCh38 chr11:63015741-63016841 strand=-1 5′→3′ 相對 TSS:-1000 到 +100 bp;1101 bp 依轉錄本 TSS 擷取的基因組序列;TSS = 0,兩端包含,未驗證為 promoter TGTGCTTCCTGGCTGGGGGATGGTGAGGAGGTCACTTAATCTCCCTTTGCCTCAGTTCCCTAATTATTAA TGCTAGACTAGTCACAGGGCTGCCGTGAGGGTTAAAAGAGCCTAATGTTGGTGGCTAGAAGTTGAGGTCT TAGACTGAAGTCTCTGCTGAGGAAAAGACCAGAAGAACAGATAGGCTCTCAGGTGAGACTGGACATTTTG CTTTGTTTTGATTTGTTTTGTTTGGCTTGTCTGTATTTCCCATGTTTTATGCAGGAAACACACATTATTA TATAATTAAAATAATATTCAGAGTGAAAATAAAACAGCAGGGACTACATTTGGTCCCCAGGGGGAAGCGG CTGATCAGGAGAGAAGCCTGTCCATTGAGGGTGGGATGGAAGGGGGCAGTTCACCTGTGTCAGAGACACA GACACGGAGGTCCTGGCTGCCCCAGGGGCCCAGGAGATGGCAGCCCTGCGTCCTCAGGGATAGATGAAAG TGACATTTTCTGTCTGGGTGTGCCCTAACACTTCCTGAGAGGCAAATCCCCTTCCCCTACTCGGGAGGTG CCAGGCAGGGGAGGTAGCACACAGGAGAATGCTGCCTGCTTACGGGCACCAGTGCCTTTCCCATTGGTTG TCCTCAGCATCAAGTCCTCTGAACATCAGTTGAGAGGGACCTTGAACCCTCAGAGGTCAGGCCAGATTCC TTCCCAGAATCTCCCCTCGGTGAGCCTGCCAGGGCTGCTCGCGTTGGGCGGATGTACAAAACGGAGGCAC GTCTCAGACTTCCCATTTGGGCCCGTGGTGTCCAGCCAGCAGCCCTGCTAGGCTCAGCCACGCTGCCCCA CCCCCAGCGGCCCTCGCTGAGGCAGCCCTTTGAGGAGAGCTGGGCTTGGTGGGTCCACAGCACTCTCCCT GCCAGTGACGTTAATCCGCAAAAGAAAGTCAAACATTAGCCCGGGAAACAGCTTATGCCTTATATAAGCC CCCCTGGGGGAGGCACAAACACAGCTTGTTAGAGCTGAGCTGCCCTACTACAGCAGCTGCCGGCCCCTAG GACAGAGCAGGGACCTCAACTACACTGATCACCAGCCCCATCGGATCCAGA
EPDnew 實驗支持 promoter/TSS · 1 筆
| EPDnew ID | TSS(1-based) | 股向 | 來源顯示區間 |
|---|---|---|---|
| SLC22A8_1 ↗ | 11:63,015,812 | 負股 | 63,015,802–63,015,861 |
EPDnew human v006 · UCSC hg38,GRCh38/hg38,透過 UCSC 取得。TSS 具有 CAGE/RAMPAGE 等實驗資料支持;任意擷取的上下游區間仍需另行判讀調控功能,不能視為整段皆經功能驗證。
EPD 封存狀態 ↗ · UCSC 資料說明 ↗ · EPD team, SIB Swiss Institute of Bioinformatics; UCSC Genome Browser · CC BY 4.0
查看已取得的調控/motif 註解
ENSR11_83T2MF · enhancer · 63015565–63015799 · regulatory
ENSR11_9X2BR · promoter · 63015800–63016080 · regulatory
ENSR11_83T2N5 · enhancer · 63016797–63017040 · regulatory
ENSR11_83T2NM · enhancer · 63017677–63017922 · regulatory
ENSR11_BGHNL · enhancer · 63020579–63021262 · regulatory
ENSR11_5JS833 · CTCF_binding_site · 63020808–63020829 · regulatory
· motif · 63020810–63020826 · motif
蛋白質結構域與序列
參考蛋白質長度:542 aa
SLC22A8 蛋白質長 542 個胺基酸,含多段跨膜螺旋;序列註解指出其膜內外區段交錯分布,末端另有一段被預測為無序的區域。蛋白質家族註解將其歸於 major facilitator 超家族及有機陽離子轉運蛋白家族。
蛋白質三維結構
細胞內定位
SLC22A8 位於細胞膜,並定位於近端腎小管細胞的基底外側膜。 脈絡叢上皮細胞的刷狀緣膜定位,以及腦毛細血管內皮細胞的血管腔外側、可能也包括腔側膜定位,則是依相似性推定。
深綠色圓點:來源記載的蛋白質定位;數量不表示含量。
動物細胞結構示意;器官大小與數量不按比例。點選細胞構造可查看定位註解。
交互作用與訊號網絡
拖曳節點後放開可帶動位置變化;點選夥伴查看證據。位置與連線長度不代表結合強度,圖中未推定夥伴彼此之間的關係。
疾病與遺傳關聯
Contextual Functional Evidence Matrix
矩陣以「功能主張」為列,以細胞情境、干預條件、量測結果與證據來源為欄,方便比較同一功能在不同條件下的支持情形。只有含情境與實驗資訊的紀錄會列入矩陣;一般功能註解另列於下方。
功能註解總覽 · 25 筆
| 功能面向 | 功能敘述 | 證據類型 | 可查核來源 |
|---|---|---|---|
| 功能 | SLC22A8 以有機陰離子/二羧酸交換方式運作,藉由二羧酸交換間接連結鈉離子梯度,運送 E1S、尿酸、前列腺素、神經活性代謝物及 biopterin 等多種物質。它參與腎臟與腦部的內源性物質和外來化合物運輸、攝取或排出;E1S 運輸受 pH 與氯離子影響,且可能涉及 E1S/cGMP 交換。部分底物作用僅被描述為可能參與或依相似性推定。 | 含實驗來源 | 證據與來源Functions as an organic anion/dicarboxylate exchanger that couples organic anion uptake indirectly to the sodium gradient. Transports organic anions such as estrone 3-sulfate (E1S) and urate in exchange for dicarboxylates such as glutarate or ketoglutarate (2-oxoglutarate). Plays an important role in the excretion of endogenous and exogenous organic anions, especially from the kidney and the brain. E1S transport is pH- and chloride-dependent and may also involve E1S/cGMP exchange. Responsible for the transport of prostaglandin E2 (PGE2) and prostaglandin F2(alpha) (PGF2(alpha)) in the basolateral side of the renal tubule. Involved in the transport of neuroactive tryptophan metabolites kynurenate and xanthurenate. Functions as a biopterin transporters involved in the uptake and the secretion of coenzymes tetrahydrobiopterin (BH4), dihydrobiopterin (BH2) and sepiapterin to urine, thereby determining baseline levels of blood biopterins. May be involved in the basolateral transport of steviol, a metabolite of the popular sugar substitute stevioside. May participate in the detoxification/ renal excretion of drugs and xenobiotics, such as the histamine H(2)-receptor antagonists fexofenadine and cimetidine, the antibiotic benzylpenicillin (PCG), the anionic herbicide 2,4-dichloro-phenoxyacetate (2,4-D), the diagnostic agent p-aminohippurate (PAH), the antiviral acyclovir (ACV), and the mycotoxin ochratoxin (OTA), by transporting these exogenous organic anions across the cell membrane in exchange for dicarboxylates such as 2-oxoglutarate. Contributes to the renal uptake of potent uremic toxins (indoxyl sulfate (IS), indole acetate (IA), hippurate/N-benzoylglycine (HA) and 3-carboxy-4-methyl-5-propyl-2-furanpropionate (CMPF)), pravastatin, PCG, E1S and dehydroepiandrosterone sulfate (DHEAS), and is partly involved in the renal uptake of temocaprilat (an angiotensin-converting enzyme (ACE) inhibitor). May contribute to the release of cortisol in the adrenals. Involved in one of the detoxification systems on the choroid plexus (CP), removes substrates such as E1S or taurocholate (TC), PCG, 2,4-D and PAH, from the cerebrospinal fluid (CSF) to the blood for eventual excretion in urine and bile (By similarity). Also contributes to the uptake of several other organic compounds such as the prostanoids prostaglandin E(2) and prostaglandin F(2-alpha), L-carnitine, and the therapeutic drugs allopurinol, 6-mercaptopurine (6-MP) and 5-fluorouracil (5-FU) (By similarity). Mediates the transport of PAH, PCG, and the statins pravastatin and pitavastatin, from the cerebrum into the blood circulation across the blood-brain barrier (BBB). In summary, plays a role in the efflux of drugs and xenobiotics, helping reduce their undesired toxicological effects on the body (By similarity) PMID 11306713 ↗ · PMID 11669456 ↗ · PMID 11907186 ↗ · PMID 14586168 ↗ · PMID 14675047 ↗ · PMID 15644426 ↗ · PMID 15846473 ↗ · PMID 15864504 ↗ · PMID 16455804 ↗ · PMID 22108572 ↗ · PMID 23832370 ↗ · PMID 26377792 ↗ · PMID 28534121 ↗ · PMID 31553721 ↗ |
| 分子活性 | estrone 3-sulfate(out) + glutarate(in) = estrone 3-sulfate(in) + glutarate(out) | 含實驗來源 | 證據與來源estrone 3-sulfate(out) + glutarate(in) = estrone 3-sulfate(in) + glutarate(out) PMID 14586168 ↗ · PMID 15846473 ↗ · PMID 15864504 ↗ · PMID 31553721 ↗ |
| 分子活性 | estrone 3-sulfate(in) + 2-oxoglutarate(out) = estrone 3-sulfate(out) + 2-oxoglutarate(in) | 含實驗來源 | 證據與來源estrone 3-sulfate(in) + 2-oxoglutarate(out) = estrone 3-sulfate(out) + 2-oxoglutarate(in) PMID 14586168 ↗ |
| 分子活性 | glutarate(in) + 2-oxoglutarate(out) = glutarate(out) + 2-oxoglutarate(in) | 含實驗來源 | |
| 分子活性 | urate(in) + 2-oxoglutarate(out) = urate(out) + 2-oxoglutarate(in) | 含實驗來源 | |
| 分子活性 | taurocholate(out) + glutarate(in) = taurocholate(in) + glutarate(out) | 推論支持 | |
| 分子活性 | dehydroepiandrosterone 3-sulfate(out) + glutarate(in) = dehydroepiandrosterone 3-sulfate(in) + glutarate(out) | 推論支持 | 證據與來源dehydroepiandrosterone 3-sulfate(out) + glutarate(in) = dehydroepiandrosterone 3-sulfate(in) + glutarate(out) PMID 11306713 ↗ |
| 分子活性 | prostaglandin F2alpha(out) + glutarate(in) = prostaglandin F2alpha(in) + glutarate(out) | 推論支持 | 證據與來源prostaglandin F2alpha(out) + glutarate(in) = prostaglandin F2alpha(in) + glutarate(out) PMID 11907186 ↗ |
| 分子活性 | prostaglandin F2alpha(out) + 2-oxoglutarate(in) = prostaglandin F2alpha(in) + 2-oxoglutarate(out) | 推論支持 | 證據與來源prostaglandin F2alpha(out) + 2-oxoglutarate(in) = prostaglandin F2alpha(in) + 2-oxoglutarate(out) PMID 11907186 ↗ |
| 分子活性 | (R)-carnitine(out) + 2-oxoglutarate(in) = (R)-carnitine(in) + 2-oxoglutarate(out) | 推論支持 | |
| 分子活性 | glutarate(in) + (R)-carnitine(out) = glutarate(out) + (R)-carnitine(in) | 推論支持 | |
| 分子活性 | prostaglandin E2(out) + 2-oxoglutarate(in) = prostaglandin E2(in) + 2-oxoglutarate(out) | 推論支持 | 證據與來源prostaglandin E2(out) + 2-oxoglutarate(in) = prostaglandin E2(in) + 2-oxoglutarate(out) PMID 11907186 ↗ |
| 分子活性 | prostaglandin E2(out) + glutarate(in) = prostaglandin E2(in) + glutarate(out) | 推論支持 | |
| 分子活性 | urate(in) + glutarate(out) = urate(out) + glutarate(in) | 含實驗來源 | |
| 分子活性 | taurocholate(out) + 2-oxoglutarate(in) = taurocholate(in) + 2-oxoglutarate(out) | 推論支持 | |
| 分子活性 | dehydroepiandrosterone 3-sulfate(out) + 2-oxoglutarate(in) = dehydroepiandrosterone 3-sulfate(in) + 2-oxoglutarate(out) | 推論支持 | 證據與來源dehydroepiandrosterone 3-sulfate(out) + 2-oxoglutarate(in) = dehydroepiandrosterone 3-sulfate(in) + 2-oxoglutarate(out) PMID 11306713 ↗ |
| 分子活性 | kynurenate(out) + a dicarboxylate(in) = kynurenate(in) + a dicarboxylate(out) | 含實驗來源 | 證據與來源kynurenate(out) + a dicarboxylate(in) = kynurenate(in) + a dicarboxylate(out) PMID 22108572 ↗ · PMID 23832370 ↗ |
| 分子活性 | (indol-3-yl)acetate(out) + a dicarboxylate(in) = (indol-3-yl)acetate(in) + a dicarboxylate(out) | 含實驗來源 | 證據與來源(indol-3-yl)acetate(out) + a dicarboxylate(in) = (indol-3-yl)acetate(in) + a dicarboxylate(out) PMID 14675047 ↗ |
| 分子活性 | indoxyl sulfate(out) + a dicarboxylate(in) = indoxyl sulfate(in) + a dicarboxylate(out) | 含實驗來源 | 證據與來源indoxyl sulfate(out) + a dicarboxylate(in) = indoxyl sulfate(in) + a dicarboxylate(out) PMID 14675047 ↗ |
| 分子活性 | N-benzoylglycine(out) + a dicarboxylate(in) = N-benzoylglycine(in) + a dicarboxylate(out) | 含實驗來源 | 證據與來源N-benzoylglycine(out) + a dicarboxylate(in) = N-benzoylglycine(in) + a dicarboxylate(out) PMID 14675047 ↗ |
| 分子活性 | 3-carboxy-4-methyl-5-propyl-2-furanpropanoate(out) + a dicarboxylate(in) = 3-carboxy-4-methyl-5-propyl-2-furanpropanoate(in) + a dicarboxylate(out) | 含實驗來源 | 證據與來源3-carboxy-4-methyl-5-propyl-2-furanpropanoate(out) + a dicarboxylate(in) = 3-carboxy-4-methyl-5-propyl-2-furanpropanoate(in) + a dicarboxylate(out) PMID 14675047 ↗ |
| 分子活性 | (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin(out) + a dicarboxylate(in) = (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin(in) + a dicarboxylate(out) | 含實驗來源 | 證據與來源(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin(out) + a dicarboxylate(in) = (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin(in) + a dicarboxylate(out) PMID 28534121 ↗ |
| 分子活性 | L-erythro-7,8-dihydrobiopterin(out) + a dicarboxylate(in) = L-erythro-7,8-dihydrobiopterin(in) + a dicarboxylate(out) | 含實驗來源 | 證據與來源L-erythro-7,8-dihydrobiopterin(out) + a dicarboxylate(in) = L-erythro-7,8-dihydrobiopterin(in) + a dicarboxylate(out) PMID 28534121 ↗ |
| 分子活性 | L-sepiapterin(out) + a dicarboxylate(in) = L-sepiapterin(in) + a dicarboxylate(out) | 含實驗來源 | 證據與來源L-sepiapterin(out) + a dicarboxylate(in) = L-sepiapterin(in) + a dicarboxylate(out) PMID 28534121 ↗ |
| 細胞定位 | SLC22A8 是多次跨膜蛋白,定位於細胞膜。已報導其位於近端腎小管細胞的基底外側膜;依相似性推定,也位於脈絡叢上皮細胞的刷狀緣膜,以及腦毛細血管內皮細胞的血管腔外側膜,並可能位於腔側膜。 | 含實驗來源 | 證據與來源Basolateral cell membrane / Multi-pass membrane protein; Localizes on the brush border membrane of the choroid epithelial cells (By similarity). Localizes to the basolateral membrane of the proximal tubular cells. Localizes on the abluminal and possibly, luminal membrane of the brain capillary endothelial cells (BCEC) (By similarity) PMID 11306713 ↗ |
核酸與蛋白質序列
ACAGCTTGTTAGAGCTGAGCTGCCCTACTACAGCAGCTGC40CGGCCCCTAGGACAGAGCAGGGACCTCAACTACACTGATC80ACCAGCCCCATCGGATCCAGACCCGGCCACCAGCTCTGGC120TCGTCTTGCCCCAGTGCCATGACCTTCTCGGAGATCCTGG160ACCGTGTGGGAAGCATGGGCCATTTCCAGTTCCTGCATGT200AGCCATACTGGGCCTCCCGATCCTCAACATGGCCAACCAC240AACCTGCTGCAGATCTTCACAGCCGCCACCCCTGTCCACC280ACTGTCGCCCGCCCCACAATGCCTCCACAGGGCCTTGGGT320GCTCCCCATGGGCCCAAATGGGAAGCCTGAGAGGTGCCTC360CGTTTTGTACATCCGCCCAATGCCAGCCTGCCCAATGACA400CCCAGAGGGCCATGGAGCCATGCCTGGATGGCTGGGTCTA440CAACAGCACCAAGGACTCCATTGTGACAGAGTGGGACTTG480GTGTGCAACTCCAACAAACTGAAGGAGATGGCCCAGTCTA520TCTTCATGGCAGGTATACTGATTGGAGGGCTCGTGCTTGG560AGACCTGTCTGACAGGTTTGGCCGCAGGCCCATCCTGACC600TGCAGCTACCTGCTGCTGGCAGCCAGCGGCTCCGGTGCAG640CCTTCAGCCCCACCTTCCCCATCTACATGGTCTTCCGCTT680CCTGTGTGGCTTTGGCATCTCAGGCATTACCCTGAGCACC720GTCATCTTGAATGTGGAATGGGTGCCTACCCGGATGCGGG760CCATCATGTCGACAGCACTCGGGTACTGCTACACCTTTGG800CCAGTTCATTCTGCCCGGCCTGGCCTACGCCATCCCCCAG840TGGCGTTGGCTGCAGTTAACTGTGTCCATTCCCTTCTTCG880TCTTCTTCCTATCATCCTGGTGGACACCAGAGTCCATACG920CTGGTTGGTCTTGTCTGGAAAGTCCTCGAAGGCCCTGAAG960cDNA 使用 DNA 字母 T;mRNA 模式改以 U 顯示。轉錄本保留已註解的非編碼區,未另外加入 poly(A) 尾;非編碼 RNA 的參考轉錄本也可能仍需後續加工。數字為所選序列的 1-based 位置。長序列以黃色捲軸瀏覽,可複製或下載完整轉錄本與蛋白質;基因組 DNA 隨捲動取得所需範圍。