演化之聲
THE SOUND OF EVOLUTION
Human Gene AtlasHOMO SAPIENS
HUMAN PROTEIN-CODING GENE

BRCA1RNF53

BRCA1 DNA repair associated

BRCA1 DNA repair associated 是參與 DNA 損傷反應與修復的蛋白質編碼基因;其產物也參與泛素化及轉錄調控。

Homo sapiens17q21.31UniProt P38398
OFFICIAL SYMBOL
BRCA1
CHROMOSOME
17
UNIPROT
P38398
PDB / ALPHAFOLD
1JNX
01 / GENE OVERVIEW

基因總覽

BRCA1 DNA repair associated 是位於人類第 17 號染色體的蛋白質編碼基因,產生名為 Breast cancer type 1 susceptibility protein 的蛋白質。此蛋白質參與維持基因組穩定性的多種細胞途徑,涵蓋 DNA 損傷修復、泛素化與轉錄調控。其分子特徵包括 N 端的 RING-type 鋅指,以及位於 C 端的兩個 BRCT 結構域;蛋白質序列中也有多段預測為無序的區域。這些結構特色構成 BRCA1 參與不同分子互作與細胞功能的基礎。

Official symbol
BRCA1
Gene name
BRCA1 DNA repair associated
Organism
Homo sapiens
Gene type
Protein coding
HGNC ID
HGNC:1100
UniProt
P38398
02 / NOMENCLATURE

基因異名與舊稱

Alternative gene names & synonyms
RNF53BRCC1PPP1R53FANCS

異名取自 HGNC,可能包含歷史名稱;蛋白質名稱以 UniProt 註解為準。

03 / GENOMIC CONTEXT

染色體位置與基因結構

Chromosome 1717q21.31
chr17 · 83,257,441 bp · GRCh38chr17p13.3 · 1–3400000 · gnegchr17p13.2 · 3400001–6500000 · gpos50chr17p13.1 · 6500001–10800000 · gnegchr17p12 · 10800001–16100000 · gpos75chr17p11.2 · 16100001–22700000 · gnegchr17p11.1 · 22700001–25100000 · acenchr17q11.1 · 25100001–27400000 · acenchr17q11.2 · 27400001–33500000 · gnegchr17q12 · 33500001–39800000 · gpos50chr17q21.1 · 39800001–40200000 · gnegchr17q21.2 · 40200001–42800000 · gpos25chr17q21.31 · 42800001–46800000 · gnegchr17q21.32 · 46800001–49300000 · gpos25chr17q21.33 · 49300001–52100000 · gnegchr17q22 · 52100001–59500000 · gpos75chr17q23.1 · 59500001–60200000 · gnegchr17q23.2 · 60200001–63100000 · gpos75chr17q23.3 · 63100001–64600000 · gnegchr17q24.1 · 64600001–66200000 · gpos50chr17q24.2 · 66200001–69100000 · gnegchr17q24.3 · 69100001–72900000 · gpos75chr17q25.1 · 72900001–76800000 · gnegchr17q25.2 · 76800001–77200000 · gpos25chr17q25.3 · 77200001–83257441 · gnegBRCA1pq1 bp83,257,441 bp
GRCh38 / 1-based inclusiveDirection: reverse strand (−)
Genomic coordinates
chr17:43,044,292–43,170,245
Gene span
125,954 bp
Strand
Reverse (−)
Gene assembly
GRCh38
查看實際轉錄本與 exon 註解
TranscriptGenomic coordinatesExons
ENST00000357654 ★43,044,295–43,125,36423
ENST0000049748843,044,292–43,125,30015
ENST0000048903743,044,292–43,125,32122
ENST0000047853143,044,292–43,125,35923
ENST0000047396143,044,292–43,125,36421
ENST0000047715243,044,292–43,125,36422
ENST0000035299343,044,292–43,125,37022
ENST0000049391943,044,292–43,125,40222
ENST0000049412343,044,292–43,125,45023
ENST0000047118143,044,292–43,125,48324
ENST0000065267243,044,292–43,125,48324
ENST0000063443343,044,292–43,170,24521

顯示 12/44 個蛋白質編碼轉錄本;canonical 優先。

帶型與著絲點依 Ensembl 座標繪製;核染色體長度以 GRCh38 第 1 號染色體為共同尺度。黃色標記表示本基因位置,細小區間加粗以利辨識;實際基因長度與 exon 見下方資料。

04 / BIOLOGICAL FUNCTION

分子功能與生物學過程

BRCA1 是 E3 泛素蛋白連接酶,能促成以 ubiquitin 的 Lys-6 相連的多聚鏈形成,並藉由泛素化參與 DNA 損傷後的細胞反應。BRCA1-BARD1 異源二聚體協調 DNA 損傷修復、泛素化與轉錄調控等途徑,協助維持基因組穩定性。BRCA1 是否也能促成其他連接型態的多聚 ubiquitin 鏈,仍不明確。

在同源重組修復(HRR)中,BRCA1 直接與 PALB2 互作,並調節 PALB2 依賴的 BRCA2-RAD51 修復機制被裝載至 DNA 斷裂處的過程,進而微調重組修復。BRCA1 也有助於 FANCD2 定位至 DNA 損傷位置,並參與中心體微管成核的調節。這些作用涉及損傷辨識後的修復因子配置與細胞反應,但來源未指出所有作用間的先後關係。

細胞遭受游離輻射後,BRCA1 是 S 期與 G2 期適當停止細胞週期所必需的因子。它也是 BRCA1-RBBP8 複合體的一員,可透過介導 RBBP8 泛素化調節 CHEK1 活化,並控制 DNA 損傷時的 G2/M 檢查點。這些細胞週期調控有助於損傷情境中的細胞反應;來源所述為其必要性與調控關係,並未將其擴大為單一作用機制。

BRCA1 還能結合失活、經磷酸化的 ACACA,阻止 ACACA 去磷酸化,因而抑制脂質合成。此外,BRCA1 可作為轉錄活化因子。其功能範圍因此不只涉及 DNA 修復,也涵蓋細胞週期、脂質合成與轉錄調控;各項作用的具體條件依所述細胞途徑而異。

05 / GENE REGULATION

Promoter 與基因調控

到

以 TSS = 0 為基準:負數為上游、正數為下游,包含起點與終點。每次最多取得 100,000 bp。

TSS: 43125364 · 負股
依所選 TSS 來源,取得指定上、下游範圍的基因組序列。
擷取區間依所選 TSS 計算;調控註解與實驗支持的 TSS 可在下方查閱。
>BRCA1 ENST00000357654 GRCh38 chr17:43125264-43126364 strand=-1 5′→3′
相對 TSS:-1000 到 +100 bp;1101 bp
依轉錄本 TSS 擷取的基因組序列;TSS = 0,兩端包含,未驗證為 promoter
CGGACAAAGACAGTAACTAGTCCCGTTTCTCCGCGTTTTCGCCAAGAAGATTGGCTCTTACCACTTGTCC
CTCAAAACGACCACCCCATTGACTGGTGGCGATTGCGTCGACGGAGACGGGGCAAAAGCAAGCTGAACCC
GAAAAATAACAAACACTGGGGCTGAGGGGTGGAACTACGAGTGCGCAGACATGGGCCAGAGCGCATTTCC
CCTGCCCCAGGCAAATTCGGCGCTCACTGCGTCCCCGCAGGCCACTGACCTTACAAGACTACTTGCCCCA
GACTCCTGGGGCTGGATGGGAATTGTAGTCTCCCTAAAGAGTTGTACGTATCTTTTTAAGGCCTAGTTTC
TGCTTTCAAAATACGAAAACATAACACTCCAGTCCATAACTGTTGACAAGTACAAGCGCGCACAGGTCTC
CAATCTATCCACTGGATTTCCGTGAGAATTGTGCCCGCTCTGGTATTGGATGTTCCTCTCCATAAGACTA
CAGTTTCTAAGGAACACTGTGGCGAAGACCTTTCATTCCGCAACGCATGCTGGAAATAATTATTTCCCTC
CACCCCCCCAACAATCCTTATTACTTATATTTACCGAAACTGGAGACCTCCATTAGGGCGGAAAGAGTGG
GGGATTGGGACCTCTTCTTACGACTGCTTTGGACAATAGGTAGCGATTCTGACCTTCGTACAGCAATTAC
TGTGATGCAATAAGCCGCAACTGGAAGAGTAGAGGCTAGAGGGCAGGCACTTTATGGCAAACTCAGGTAG
AATTCTTCCTCTTCCGTCTCTTTCCTTTTACGTCATCCGGGGGCAGACTGGGTGGCCAATCCAGAGCCCC
GAGAGACGCTTGGCTCTTTCTGTCCCTCCCATCCTCTGATTGTACCTTGATTTCGTATTCTGAGAGGCTG
CTGCTTAGCGGTAGCCCCTTGGTTTCCGTGGCAACGGAAAAGCGCGGGAATTACAGATAAATTAAAACTG
CGACTGCGCGGCGTGAGCTCGCTGAGACTTCCTGGACGGGGGACAGGCTGTGGGGTTTCTCAGATAACTG
GGCCCCTGCGCTCAGGAGGCCTTCACCCTCTGCTCTGGGTAAAGGTAGTAG
BRCA1 位於負股。上下游依轉錄方向計算,序列一律以該方向的 5′→3′ 顯示;負股會取得反向互補序列。
EPDnew 實驗支持 promoter/TSS · 4 筆
EPDnew IDTSS(1-based)股向來源顯示區間
BRCA1_4 ↗17:43,125,202負股43,125,192–43,125,251
BRCA1_1 ↗17:43,125,364負股43,125,354–43,125,413
BRCA1_3 ↗17:43,125,483負股43,125,473–43,125,532
BRCA1_2 ↗17:43,170,207負股43,170,197–43,170,256

EPDnew human v006 · UCSC hg38,GRCh38/hg38,透過 UCSC 取得。TSS 具有 CAGE/RAMPAGE 等實驗資料支持;任意擷取的上下游區間仍需另行判讀調控功能,不能視為整段皆經功能驗證。

EPD 封存狀態 ↗ · UCSC 資料說明 ↗ · EPD team, SIB Swiss Institute of Bioinformatics; UCSC Genome Browser · CC BY 4.0

目前未取得此類註解。
序列擷取依所選 TSS 與相對範圍計算;該區間的調控功能需參照相應的實驗證據。
06 / PROTEIN ANATOMY

蛋白質結構域與序列

參考蛋白質長度:1863 aa

1 aa1863 aa結構域功能區域鋅指
依 P38398 的 UniProt 殘基座標與蛋白質長度繪製;結構域、DNA 結合區、功能區域與基序分列,重疊註解分行顯示。區域色彩區分類型,並非活性或信心分數。

Breast cancer type 1 susceptibility protein 長 1,863 個胺基酸。N 端第 24–65 位含 RING-type 鋅指;C 端第 1,642–1,736 位與第 1,756–1,855 位分別為 BRCT 1、BRCT 2。序列另有多段註記為無序的區域;第 1,397–1,424 位則標示為與 PALB2 互作的區域。

結構域BRCT 11642–1736 aa
結構域BRCT 21756–1855 aa
鋅指RING-type24–65 aa
功能區域Disordered230–270 aa
功能區域Disordered306–338 aa
功能區域Disordered534–570 aa
功能區域Disordered654–709 aa
功能區域Disordered1181–1216 aa
功能區域Disordered1322–1387 aa
功能區域Interaction with PALB21397–1424 aa
功能區域Disordered1440–1505 aa
功能區域Disordered1565–1596 aa
07 / STRUCTURAL BIOLOGY

蛋白質三維結構

自動載入 · 可拖曳旋轉與縮放
正在載入 PDB · 1JNX…

PDB · 1JNX

X-ray · 2.50 A · X=1646-1859

查看原始結構紀錄 ↗

實驗模型;依序列位置著色,可能只覆蓋局部區域。

08 / SUBCELLULAR LOCALIZATION

細胞內定位

動物細胞結構與蛋白質定位細胞膜包圍細胞質;細胞核內有核仁,粗面內質網鄰接核膜,粒線體含內膜摺疊,高基氏體由堆疊扁平囊組成。深綠色圓點依來源註解標記定位,器官大小與數量為示意。圓點數量不表示含量;未繪示構造列於圖旁文字。 細胞質 細胞膜 粗面內質網與核糖體 細胞核與核膜 核仁 粒線體:外膜與含摺疊的內膜 高基氏體與運輸囊泡 胞內體、溶體與其他囊泡(示意)
定位:Nucleus;Chromosome;Cytoplasm

BRCA1 可見於細胞核、染色體與細胞質,並可在 DNA 雙股斷裂損傷處聚集;其被招募至損傷位置由 ABRAXAS1 與 BRCA1-A 複合體介導。 UV 誘發細胞凋亡時,BRCA1 會轉移至細胞質。 另有資料指出 Isoform 3 與 Isoform 5 位於細胞質。

深綠色圓點:來源記載的蛋白質定位;數量不表示含量。

未繪示構造:Chromosome。這些構造未在通用細胞圖中標點,仍保留來源定位名稱。

動物細胞結構示意;器官大小與數量不按比例。點選細胞構造可查看定位註解。

09 / PROTEIN NETWORK

交互作用與訊號網絡

圖中 39 個夥伴 · 最多顯示 50 個
RNF53BRCA1ABRAXAS1ACACABAP1BARD1BRAPBRAT1BRIP1CCND1CCNE1CHEK1ESR1ESR2FHL2GTF2IH2AXHMMRHSPD1IFI16KPNA2MDC1NELFBPALB2PPP1CAPPP1CBPPP1CCPPP1R9BRBBP8SUMO1SUMO2TOP2ATP53BP1UIMC1ZCCHC8ZGRF1ZNF350Ezh2PIN1BECN1HTT
來源支持的結構/直接結合關係其他來源關係紀錄

拖曳節點後放開可帶動位置變化;點選夥伴查看證據。位置與連線長度不代表結合強度,圖中未推定夥伴彼此之間的關係。

更多交互作用夥伴 · 已取得 39 個夥伴
第 1 頁

查看 UniProt 完整互作來源 ↗

BRCA1 與 BARD1 形成異源二聚體,也是 BRCA1-A、BRCA1-RBBP8、BRCA1-associated genome surveillance complex(BASC),以及含 BRCA1、BRCA2 與 PALB2 的複合體成員。它直接與 PALB2 互作;BRCA1 與 BRCA2 的互作則須有 PALB2 作為橋接蛋白。BRCA1 的 BRCT 結構域可與磷酸化 ABRAXAS1、RBBP8 等互作,前者關係到損傷位置招募,後者涉及 RBBP8 泛素化及檢查點調節。BASC 的組成關係可能隨細胞週期及細胞核內區域而變動。

10 / HUMAN HEALTH

疾病與遺傳關聯

BRCA1 變異與乳癌、家族性乳癌與卵巢癌易感性相關,也與卵巢癌、胰臟癌及 Fanconi 貧血互補群 S 的易感性相關;這些資料描述的是疾病易感關聯,不應視為每個病例均由 BRCA1 變異造成。來源指出,BRCA1 突變被認為與 45% 的遺傳性乳癌及逾 80% 的遺傳性乳癌-卵巢癌有關。BRCA1 攜帶者的結腸癌風險為 4 倍,男性攜帶者的前列腺癌風險為 3 倍。缺乏 BRCA1 的細胞則有同源重組 DNA 修復缺陷。

個別變異的臨床意義取決於其證據;基因層級的疾病關聯不能套用至所有變異。
11 / CONTEXTUAL FUNCTIONAL EVIDENCE MATRIX

Contextual Functional Evidence Matrix

功能證據與細胞情境矩陣

矩陣以「功能主張」為列,以細胞情境、干預條件、量測結果與證據來源為欄,方便比較同一功能在不同條件下的支持情形。只有含情境與實驗資訊的紀錄會列入矩陣;一般功能註解另列於下方。

12 筆功能證據/註解
目前尚無同時具備實驗情境與干預/量測資訊的證據列。可查核的功能敘述列於「功能註解總覽」,空白實驗欄位不以推測補齊。
功能註解總覽 · 12 筆
功能面向功能敘述證據類型可查核來源
功能BRCA1 是 E3 泛素蛋白連接酶,特別促成以 Lys-6 相連的多聚泛素鏈形成;它參與 DNA 損傷反應與修復,但是否也促成其他型態的多聚鏈尚不明確。BRCA1-BARD1 異源二聚體協調 DNA 修復、泛素化及轉錄調控以維持基因組穩定性。BRCA1 亦調節中心體微管成核,參與游離輻射後 S 期與 G2 期細胞週期停止、FANCD2 定位、同源重組修復及 CHEK1/G2-M 檢查點調控,並能抑制脂質合成及活化轉錄。含實驗來源
證據與來源

E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain genomic stability. Regulates centrosomal microtubule nucleation. Required for appropriate cell cycle arrests after ionizing irradiation in both the S-phase and the G2 phase of the cell cycle. Required for FANCD2 targeting to sites of DNA damage. Inhibits lipid synthesis by binding to inactive phosphorylated ACACA and preventing its dephosphorylation. Contributes to homologous recombination repair (HRR) via its direct interaction with PALB2, fine-tunes recombinational repair partly through its modulatory role in the PALB2-dependent loading of BRCA2-RAD51 repair machinery at DNA breaks. Component of the BRCA1-RBBP8 complex which regulates CHEK1 activation and controls cell cycle G2/M checkpoints on DNA damage via BRCA1-mediated ubiquitination of RBBP8. Acts as a transcriptional activator

PMID 10500182 ↗ · PMID 10724175 ↗ · PMID 11836499 ↗ · PMID 12183412 ↗ · PMID 12887909 ↗ · PMID 12890688 ↗ · PMID 14976165 ↗ · PMID 16326698 ↗ · PMID 16818604 ↗ · PMID 17525340 ↗ · PMID 18056443 ↗ · PMID 19261748 ↗ · PMID 19369211 ↗ · PMID 20160719 ↗ · PMID 20351172 ↗

開啟資料庫紀錄 ↗

分子活性S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.含實驗來源
證據與來源

S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.

PMID 10500182 ↗ · PMID 12887909 ↗ · PMID 12890688 ↗ · PMID 16818604 ↗ · PMID 18056443 ↗ · PMID 20351172 ↗

開啟資料庫紀錄 ↗

分子活性BRCA1 參與蛋白質修飾,具體涉及蛋白質泛素化。資料庫紀錄
證據與來源

Protein modification; protein ubiquitination

開啟資料庫紀錄 ↗

交互作用BRCA1 與 BARD1 形成異源二聚體,並屬於 BASC、BRCA1-A 與 BRCA1-RBBP8 等複合體;BASC 關聯可能隨細胞週期及核內區域改變。BRCT 結構域與磷酸化 ABRAXAS1、RBBP8、BRIP1、ACACA 等互作,分別涉及損傷處招募、檢查點調節、轉錄抑制或阻止 ACACA 去磷酸化。BRCA1 直接與 PALB2 互作,並須由 PALB2 橋接才與 BRCA2 互作;另與多種修復、檢查點及轉錄相關蛋白有互作。含實驗來源
證據與來源

Heterodimer with BARD1. Part of the BRCA1-associated genome surveillance complex (BASC), which contains BRCA1, MSH2, MSH6, MLH1, ATM, BLM, PMS2 and the MRE11-RAD50-NBN protein (MRN) complex. This association could be a dynamic process changing throughout the cell cycle and within subnuclear domains. Component of the BRCA1-A complex, at least composed of BRCA1, BARD1, UIMC1/RAP80, ABRAXAS1, BRCC3/BRCC36, BABAM2 and BABAM1/NBA1. Interacts (via the BRCT domains) with ABRAXAS1 (phosphorylated form); this is important for recruitment to sites of DNA damage. Can form a heterotetramer with two molecules of ABRAXAS1 (phosphorylated form). Component of the BRCA1-RBBP8 complex. Interacts (via the BRCT domains) with RBBP8 ('Ser-327' phosphorylated form); the interaction ubiquitinates RBBP8, regulates CHEK1 activation, and involves RBBP8 in BRCA1-dependent G2/M checkpoint control on DNA damage. Associates with RNA polymerase II holoenzyme. Interacts with SMC1A, NELFB, DCLRE1C, CLSPN. Interacts with CHEK1, CHEK2, BAP1, BRCC3, UBXN1 and PCLAF. Interacts (via BRCT domains) with BRIP1 (phosphorylated form). Interacts with FANCD2 (ubiquitinated form). Interacts with H2AX (phosphorylated on 'Ser-140'). Interacts (via the BRCT domains) with ACACA (phosphorylated form); the interaction prevents dephosphorylation of ACACA. Part of a BRCA complex containing BRCA1, BRCA2 and PALB2. Interacts directly with PALB2; the interaction is essential for its function in HRR. Interacts directly with BRCA2; the interaction occurs only in the presence of PALB2 which serves as the bridging protein. Interacts (via the BRCT domains) with LMO4; the interaction represses the transcriptional activity of BRCA1. Interacts (via the BRCT domains) with CCAR2 (via N-terminus); the interaction represses the transcriptional activator activity of BRCA1. Interacts with EXD2. Interacts (via C-terminus) with DHX9; this interaction is direct and links BRCA1 to the RNA polymerase II holoenzyme. Interacts with DNA helicase ZGRF1; the interaction is increased following DNA damage induction. Interacts with FBXO44; this interaction mediates BRCA1 ubiquitination and subsequent degradation

PMID 10724175 ↗ · PMID 10783165 ↗ · PMID 11239454 ↗ · PMID 11301010 ↗ · PMID 11573085 ↗ · PMID 11739404 ↗ · PMID 11751867 ↗ · PMID 11836499 ↗ · PMID 11877377 ↗ · PMID 12360400 ↗ · PMID 12419185 ↗ · PMID 12890688 ↗ · PMID 14636569 ↗ · PMID 14976165 ↗ · PMID 15096610 ↗ · PMID 15133502 ↗ · PMID 15456891 ↗ · PMID 16101277 ↗ · PMID 16326698 ↗ · PMID 16698035 ↗ · PMID 16818604 ↗ · PMID 17525340 ↗ · PMID 17643121 ↗ · PMID 17643122 ↗ · PMID 18452305 ↗ · PMID 19261746 ↗ · PMID 19261748 ↗ · PMID 19261749 ↗ · PMID 19369211 ↗ · PMID 20159462 ↗

開啟資料庫紀錄 ↗

細胞定位BRCA1 位於細胞核、染色體及細胞質,也會聚集於 DNA 雙股斷裂損傷處;ABRAXAS1 與 BRCA1-A 複合體介導其招募。UV 誘發細胞凋亡期間,BRCA1 會轉移至細胞質。含實驗來源
證據與來源

Nucleus; Chromosome; Cytoplasm; Localizes at sites of DNA damage at double-strand breaks (DSBs); recruitment to DNA damage sites is mediated by ABRAXAS1 and the BRCA1-A complex. Translocated to the cytoplasm during UV-induced apoptosis

PMID 15133502 ↗ · PMID 17525340 ↗ · PMID 20160719 ↗ · PMID 21144835 ↗ · PMID 26778126 ↗ · PMID 9528852 ↗ · PMID 23269703 ↗ · PMID 25472942 ↗

開啟資料庫紀錄 ↗

細胞定位Isoform 3 位於細胞質。資料庫紀錄
證據與來源

Isoform 3; Cytoplasm

開啟資料庫紀錄 ↗

細胞定位Isoform 5 位於細胞質。含實驗來源
證據與來源

Isoform 5; Cytoplasm

PMID 8972225 ↗

開啟資料庫紀錄 ↗

疾病關聯BRCA1 變異與乳癌易感性相關;乳癌具有遺傳與病因異質性,家族性發病及雙側病灶是重要遺傳因素線索,且不同家族或同一病例可能涉及多個基因位點。BRCA1 突變被認為與 45% 的遺傳性乳癌有關。BRCA1 攜帶者結腸癌風險增加 4 倍,男性攜帶者前列腺癌風險增加 3 倍;缺乏 BRCA1 的細胞有同源重組 DNA 修復缺陷。含實驗來源
證據與來源

Breast cancer BC A common malignancy originating from breast epithelial tissue. Breast neoplasms can be distinguished by their histologic pattern. Invasive ductal carcinoma is by far the most common type. Breast cancer is etiologically and genetically heterogeneous. Important genetic factors have been indicated by familial occurrence and bilateral involvement. Mutations at more than one locus can be involved in different families or even in the same case. Disease susceptibility is associated with variants affecting the gene represented in this entry. Mutations in BRCA1 are thought to be responsible for 45% of inherited breast cancer. Moreover, BRCA1 carriers have a 4-fold increased risk of colon cancer, whereas male carriers face a 3-fold increased risk of prostate cancer. Cells lacking BRCA1 show defects in DNA repair by homologous recombination MIM: 114480

PMID 10323242 ↗ · PMID 11114888 ↗ · PMID 11301010 ↗ · PMID 12427738 ↗ · PMID 12442275 ↗ · PMID 12938098 ↗ · PMID 14722926 ↗ · PMID 15133502 ↗ · PMID 18285836 ↗ · PMID 21473589 ↗ · PMID 23867111 ↗ · PMID 28364669 ↗ · PMID 7545954 ↗ · PMID 7894491 ↗ · PMID 7894493 ↗ · PMID 7939630 ↗ · PMID 8554067 ↗ · PMID 8723683 ↗ · PMID 8776600 ↗ · PMID 8807330 ↗ · PMID 9482581 ↗ · PMID 9609997 ↗ · PMID 9760198 ↗

開啟資料庫紀錄 ↗

疾病關聯BRCA1 變異與家族性乳癌-卵巢癌易感性相關。相關家族常見乳癌較早發病(常在 50 歲前)、雙側乳房或卵巢分別發生癌症、男性乳癌較常見,且前列腺等特定器官腫瘤增加。BRCA1 突變被認為與逾 80% 的遺傳性乳癌-卵巢癌有關。含實驗來源
證據與來源

Breast-ovarian cancer, familial, 1 BROVCA1 A condition associated with familial predisposition to cancer of the breast and ovaries. Characteristic features in affected families are an early age of onset of breast cancer (often before age 50), increased chance of bilateral cancers (cancer that develop in both breasts, or both ovaries, independently), frequent occurrence of breast cancer among men, increased incidence of tumors of other specific organs, such as the prostate. Disease susceptibility is associated with variants affecting the gene represented in this entry. Mutations in BRCA1 are thought to be responsible for more than 80% of inherited breast-ovarian cancer MIM: 604370

PMID 12938098 ↗ · PMID 14722926 ↗ · PMID 17924331 ↗ · PMID 20513136 ↗ · PMID 28364669 ↗ · PMID 8968716 ↗

開啟資料庫紀錄 ↗

疾病關聯BRCA1 變異與卵巢癌易感性相關。卵巢癌包括多種組織型態,其中上皮性卵巢癌最常見;卵巢癌常無症狀,已出現的徵象與症狀即使在晚期也可能不明顯,因此多數患者確診時疾病已進展。含實驗來源
證據與來源

Ovarian cancer OC The term ovarian cancer defines malignancies originating from ovarian tissue. Although many histologic types of ovarian tumors have been described, epithelial ovarian carcinoma is the most common form. Ovarian cancers are often asymptomatic and the recognized signs and symptoms, even of late-stage disease, are vague. Consequently, most patients are diagnosed with advanced disease. Disease susceptibility is associated with variants affecting the gene represented in this entry MIM: 167000

PMID 10196379 ↗ · PMID 10486320 ↗ · PMID 14746861 ↗ · PMID 28364669 ↗

開啟資料庫紀錄 ↗

疾病關聯BRCA1 變異與胰臟癌易感性相關。胰臟惡性腫瘤可起源於胰臟外分泌或內分泌部分;其中 95% 發生於外分泌部分,涵蓋導管上皮、腺泡細胞、結締組織及淋巴組織。含實驗來源
證據與來源

Pancreatic cancer 4 PNCA4 A malignant neoplasm of the pancreas. Tumors can arise from both the exocrine and endocrine portions of the pancreas, but 95% of them develop from the exocrine portion, including the ductal epithelium, acinar cells, connective tissue, and lymphatic tissue. Disease susceptibility is associated with variants affecting the gene represented in this entry MIM: 614320

PMID 18762988 ↗

開啟資料庫紀錄 ↗

疾病關聯BRCA1 變異與 Fanconi 貧血互補群 S 的易感性相關。Fanconi 貧血可影響所有骨髓成分,造成貧血、白血球減少及血小板減少,也可能伴隨心臟、腎臟與肢體畸形、皮膚色素改變及癌症易感性;細胞層級則與 DNA 損傷因子敏感、染色體不穩定及 DNA 修復缺陷相關。含實驗來源
證據與來源

Fanconi anemia, complementation group S FANCS A form of Fanconi anemia, a disorder affecting all bone marrow elements and resulting in anemia, leukopenia and thrombopenia. It is associated with cardiac, renal and limb malformations, dermal pigmentary changes, and a predisposition to the development of malignancies. At the cellular level it is associated with hypersensitivity to DNA-damaging agents, chromosomal instability (increased chromosome breakage) and defective DNA repair. Disease susceptibility is associated with variants affecting the gene represented in this entry MIM: 617883

PMID 23269703 ↗ · PMID 25472942 ↗ · PMID 29133208 ↗

開啟資料庫紀錄 ↗

情境矩陣 0 筆 · 一般功能註解 12 筆。互作清單與機器格式紀錄不列入本區。
證據分項判讀,不加總為單一可信度分數。「含實驗來源」依資料庫證據標記辨識;未逐篇核對原始方法的紀錄,不宣稱已完成實驗審查。
12 / SEQUENCE EXPLORER

核酸與蛋白質序列

完整轉錄本 · UTR / CDS 著色 · FASTA
ENST00000357654 · 7,088 nt · GRCh38
依 Ensembl exon 註解拼接的 GRCh38 參考序列,保留非編碼區。
1GCTGAGACTTCCTGGACGGGGGACAGGCTGTGGGGTTTCT40
41CAGATAACTGGGCCCCTGCGCTCAGGAGGCCTTCACCCTC80
81TGCTCTGGGTAAAGTTCATTGGAACAGAAAGAAATGGATT120
121TATCTGCTCTTCGCGTTGAAGAAGTACAAAATGTCATTAA160
161TGCTATGCAGAAAATCTTAGAGTGTCCCATCTGTCTGGAG200
201TTGATCAAGGAACCTGTCTCCACAAAGTGTGACCACATAT240
241TTTGCAAATTTTGCATGCTGAAACTTCTCAACCAGAAGAA280
281AGGGCCTTCACAGTGTCCTTTATGTAAGAATGATATAACC320
321AAAAGGAGCCTACAAGAAAGTACGAGATTTAGTCAACTTG360
361TTGAAGAGCTATTGAAAATCATTTGTGCTTTTCAGCTTGA400
401CACAGGTTTGGAGTATGCAAACAGCTATAATTTTGCAAAA440
441AAGGAAAATAACTCTCCTGAACATCTAAAAGATGAAGTTT480
481CTATCATCCAAAGTATGGGCTACAGAAACCGTGCCAAAAG520
521ACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGGAA560
561ACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGA600
601GAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAGAC640
641GTCTGTCTACATTGAATTGGGATCTGATTCTTCTGAAGAT680
681ACCGTTAATAAGGCAACTTATTGCAGTGTGGGAGATCAAG720
721AATTGTTACAAATCACCCCTCAAGGAACCAGGGATGAAAT760
761CAGTTTGGATTCTGCAAAAAAGGCTGCTTGTGAATTTTCT800
801GAGACGGATGTAACAAATACTGAACATCATCAACCCAGTA840
841ATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAG880
881GCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTG920
921CATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCAT960

cDNA 使用 DNA 字母 T;mRNA 模式改以 U 顯示。轉錄本保留已註解的非編碼區,未另外加入 poly(A) 尾;非編碼 RNA 的參考轉錄本也可能仍需後續加工。數字為所選序列的 1-based 位置。長序列以黃色捲軸瀏覽,可複製或下載完整轉錄本與蛋白質;基因組 DNA 隨捲動取得所需範圍。